RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 BRINP1O60477 761 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 DLX3O60479 287 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 NPHS1O60500 1241 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 ZBTB11O95625 1053 aaPredicted RBP11.12□□□□□ -0.63
PFDN1-201ENST00000261813 VIMP08670 466 aaKnown RBP11.12□□□□□ -0.63
PFDN1-201ENST00000261813 JMJD7P0C870 316 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 TSPAN7P41732 249 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 PIK3CGP48736 1102 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 RAB15P59190 212 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 TBPL1P62380 186 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 HERVK_113P63132 956 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 HSD11B2P80365 405 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 TSTA3Q13630 321 aaPredicted RBP11.12□□□□□ -0.63
PFDN1-201ENST00000261813 KCNAB1Q14722 419 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 SF1Q15637 639 aaKnown RBP11.12□□□□□ -0.63
PFDN1-201ENST00000261813 CHI3L2Q15782 390 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 ZIC1Q15915 447 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 KIAA1614Q5VZ46 1190 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 AGTRAPQ6RW13 159 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 PROSER1Q86XN7 944 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 D2HGDHQ8N465 521 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 PDPRQ8NCN5 879 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 FBXL8Q96CD0 374 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 NXPE2Q96DL1 559 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 L3HYPDHQ96EM0 354 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 MIPEPQ99797 713 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 ACAT2Q9BWD1 397 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 ERVK-6Q9BXR3 956 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 ATG10Q9H0Y0 220 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 C12orf65Q9H3J6 166 aaKnown RBP11.12□□□□□ -0.63
PFDN1-201ENST00000261813 AKAP7Q9P0M2 348 aaPredicted RBP11.12□□□□□ -0.63
PFDN1-201ENST00000261813 KLHL20Q9Y2M5 609 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 PCDHB11Q9Y5F2 797 aa11.12□□□□□ -0.63
PFDN1-201ENST00000261813 A8MT66 165 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 TCP11X1B4DZS4 312 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 C9orf172C9J069 976 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 UBXN8O00124 270 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 TAF4O00268 1085 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 TNFSF15O95150 251 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 SBK3P0C264 359 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 EBLN1P0CF75 366 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 BMP2P12643 396 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 MTHFD2P13995 350 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 FOLR1P15328 257 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 MAGP20916 626 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 BGNP21810 368 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 HK2P52789 917 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 MAPK10P53779 464 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 MC2RQ01718 297 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 CYP4F3Q08477 520 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 GALNT1Q10472 559 aaPredicted RBP11.11□□□□□ -0.63
PFDN1-201ENST00000261813 NAE1Q13564 534 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 PFKFB4Q16877 469 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 FCRL6Q6DN72 434 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 IGF2-ASQ6U949 168 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 PTGR2Q8N8N7 351 aaPredicted RBP11.11□□□□□ -0.63
PFDN1-201ENST00000261813 C19orf47Q8N9M1 422 aaKnown RBP11.11□□□□□ -0.63
PFDN1-201ENST00000261813 OR2L3Q8NG85 312 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 OR56A3Q8NH54 315 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 EXT2Q93063 718 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 PYCR2Q96C36 320 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 RHBDF1Q96CC6 855 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 SLC46A1Q96NT5 459 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 CTRCQ99895 268 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 EGFL8Q99944 293 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 SGPP1Q9BX95 441 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 C1QTNF3Q9BXJ4 246 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 EPN3Q9H201 632 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 APMAPQ9HDC9 416 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 FAM60AQ9NP50 221 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 SLC6A20Q9NP91 592 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 ASCL3Q9NQ33 180 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 CCDC177Q9NQR7 707 aaPredicted RBP11.11□□□□□ -0.63
PFDN1-201ENST00000261813 ABCF3Q9NUQ8 709 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 SOHLH2Q9NX45 425 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 TAC3Q9UHF0 121 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.11□□□□□ -0.63
PFDN1-201ENST00000261813 AK5Q9Y6K8 562 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 KIF26BQ2KJY2 2108 aa11.11□□□□□ -0.63
PFDN1-201ENST00000261813 DMXL2Q8TDJ6 3036 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 IGKV1-8A0A0C4DH67 115 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 NCF1BA6NI72 391 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 NCF1CA8MVU1 366 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 CDRT15L2A8MXV6 281 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 HCRTR1O43613 425 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 NRP2O60462 931 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 MLYCDO95822 493 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 CAPNS1P04632 268 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 NCF1P14598 390 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 GGT5P36269 586 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 GRIA3P42263 894 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 GABRA4P48169 554 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 SLC1A6P48664 564 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 ARL4DP49703 201 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 NAGLUP54802 743 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 ABCE1P61221 599 aaKnown RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 CBX1P83916 185 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 PRDX1Q06830 199 aaKnown RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 SETDB1Q15047 1291 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 PCBP2Q15366 365 aaKnown RBP eCLIP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms