RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PDLIM7Q9NR12 457 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SNTG1Q9NSN8 517 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ADAM30Q9UKF2 790 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 KCNJ14Q9UNX9 436 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 USP22Q9UPT9 525 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MRPS2Q9Y399 296 aaKnown RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 CAMTA1Q9Y6Y1 1673 aa7.52□□□□□ -1.2
GPNMB-201ENST00000258733 SPATA31A3Q5VYP0 1347 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 NEMP2A6NFY4 417 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ALG1L2C9J202 215 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 UBE2CO00762 179 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 NUDT21O43809 227 aaKnown RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 PRKYO43930 277 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 GPRIN2O60269 458 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 TSPAN2O60636 221 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 PPP6R2O75170 966 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 LGI1O95970 557 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 MT-CYBP00156 380 aaPredicted RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 HMGCRP04035 888 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 CCNYL3P0C7X3 344 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 STAG3L1P0CL83 205 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 FGFR1P11362 822 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ELK4P28324 431 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 GTF2E2P29084 291 aaKnown RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 CD6P30203 668 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 GPR15P49685 360 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ELP6Q0PNE2 266 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 SLAQ13239 276 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 TRA2AQ13595 282 aaKnown RBP eCLIP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ANKRD22Q5VYY1 191 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 RRAGBQ5VZM2 374 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 C16orf89Q6UX73 402 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 PGAP1Q75T13 922 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 SLC35F3Q8IY50 421 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 DMBX1Q8NFW5 382 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 RPL3LQ92901 407 aaKnown RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 MRPL38Q96DV4 380 aaKnown RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 AMDHD1Q96NU7 426 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 DBNDD2Q9BQY9 259 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ACBD6Q9BR61 282 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 DPH7Q9BTV6 452 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 REG4Q9BYZ8 158 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 DNTTIP1Q9H147 329 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 MIXL1Q9H2W2 232 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 PDZD7Q9H5P4 517 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 BRF2Q9HAW0 419 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 KRT84Q9NSB2 600 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 OR12D3Q9UGF7 316 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 IL20RAQ9UHF4 553 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 KCNIP3Q9Y2W7 256 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 RBM8AQ9Y5S9 174 aaKnown RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ADAMTS7Q9UKP4 1686 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 SAC3D1A6NKF1 404 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 RBAK-RBAKDNI3L0D1 243 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 CXCL11O14625 94 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 EIF3DO15371 548 aaKnown RBP eCLIP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 PRPF4O43172 522 aaKnown RBP eCLIP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 COCHO43405 550 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 AKR7A3O95154 331 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 IL18RAPO95256 599 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ANGPTL1O95841 491 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 TTLL1O95922 423 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ALDH1A1P00352 501 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 AHSGP02765 367 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 FTH1P02794 183 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 IFNA6P05013 189 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 SERPINA5P05154 406 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 IQCF3P0C7M6 154 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 IFNGR1P15260 489 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ANXA7P20073 488 aaKnown RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 SPRP35270 261 aaPredicted RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 SOX10P56693 466 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 CXCR4P61073 352 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 SERTAD2Q14140 314 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 CNKSR3Q6P9H4 555 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ALYREFQ86V81 257 aaKnown RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 POMGNT2Q8NAT1 580 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ADPRHL1Q8NDY3 354 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 RPL10LQ96L21 214 aaKnown RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 PACRGQ96M98 296 aaPredicted RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ACTL8Q9H568 366 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 RBAKQ9NYW8 714 aaPredicted RBP7.52□□□□□ -1.21
GPNMB-201ENST00000258733 ADAMTS13Q76LX8 1427 aa7.52□□□□□ -1.21
GPNMB-201ENST00000258733 FAM205AQ6ZU69 1335 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 A0A1W2PPH5 198 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 FAM187AA6NFU0 413 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 LGALS16A8MUM7 142 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 NPIPA7E9PJI5 369 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 CHP2O43745 196 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 KHDRBS3O75525 346 aaKnown RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 NPSP0C0P6 89 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 CTXN2P0C2S0 81 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 NPIPA8P0DM63 369 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 DDTP30046 118 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 CCR6P51684 374 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ARSEP51690 589 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 WNT7BP56706 349 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 GAD2Q05329 585 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 RAB33AQ14088 237 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MEP1AQ16819 746 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms