RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 COMMD4Q9H0A8 199 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 GLOD4Q9HC38 313 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SIRT7Q9NRC8 400 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 APEX2Q9UBZ4 518 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 KIF25Q9UIL4 384 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 IKZF3Q9UKT9 509 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CNOT6Q9ULM6 557 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PCDHGA7Q9Y5G6 932 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 DMRT1Q9Y5R6 373 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 KDM3BQ7LBC6 1761 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PKIAP61925 76 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 KCNH2Q12809 1159 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 NAE1Q13564 534 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PTK6Q13882 451 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CLLU1Q5K131 121 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ZCCHC9Q8N567 271 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF248Q8NDW4 579 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 MRPL48Q96GC5 212 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 APBA2Q99767 749 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 STRA6Q9BX79 667 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 TASP1Q9H6P5 420 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC2A9Q9NRM0 540 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ZFP57Q9NU63 452 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 H2AFY2Q9P0M6 372 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 POMT1Q9Y6A1 747 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CLCA3PQ9Y6N3 262 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PROM1O43490 865 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 TCF21O43680 179 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 XPNPEP2O43895 674 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 CKMP06732 381 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 UCHL3P15374 230 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 NUBP1P53384 320 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 NHLH2Q02577 135 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 FAAP100Q0VG06 881 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 APOFQ13790 326 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MLC1Q15049 377 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MAP1SQ66K74 1059 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 INO80EQ8NBZ0 244 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 FBXO32Q969P5 355 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PURBQ96QR8 312 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PIGQQ9BRB3 760 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MRIQ9BWK5 157 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 RGS18Q9NS28 235 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM39AQ9NV64 488 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 AKR7A2O43488 359 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 DFFBO76075 338 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 TOX4O94842 621 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF432O94892 652 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 RPLP1P05386 114 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MYF6P23409 242 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 CRHR1P34998 444 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MSX2P35548 267 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 UBE2IP63279 158 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 SF1Q15637 639 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 GPR19Q15760 415 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 IFI44LQ53G44 452 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 RNASE10Q5GAN6 216 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PIWIL3Q7Z3Z3 882 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PSTKQ8IV42 348 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 STK40Q8N2I9 435 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 GLB1L3Q8NCI6 653 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 BIRC7Q96CA5 298 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 UBP1Q9NZI7 540 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 TRPC4Q9UBN4 977 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 GTF2IRD1Q9UHL9 959 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 RNF6Q9Y252 685 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 WASHC1A8K0Z3 465 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 WASH3PC4AMC7 463 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 C2P06681 752 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ASGR1P07306 291 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 CCNOP22674 350 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 GPX6P59796 221 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 GABARAPL2P60520 117 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC9A3R2Q15599 337 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ATP6AP1Q15904 470 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 SCGB2B2Q4G0G5 96 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 FLYWCH1Q4VC44 716 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 C14orf28Q4W4Y0 310 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 GLYATQ6IB77 296 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM199XQ6PEV8 388 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PADI6Q6TGC4 694 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 WASH2PQ6VEQ5 465 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 SCARA5Q6ZMJ2 495 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MMP19Q99542 508 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 THUMPD3Q9BV44 507 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PBDC1Q9BVG4 233 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 CIPCQ9C0C6 399 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ESRP2Q9H6T0 727 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 SNTG1Q9NSN8 517 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 KCND2Q9NZV8 630 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 AKT3Q9Y243 479 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 V9GYS6 101 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 TRPM3Q9HCF6 1732 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ALS2Q96Q42 1657 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 GPRIN2O60269 458 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 APEHP13798 732 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 DGKAP23743 735 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 DPP6P42658 865 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 FXR2P51116 673 aaKnown RBP eCLIP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms