RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 DDX5P17844 614 aaKnown RBP14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 PFKLP17858 780 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 CTSKP43235 329 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 DGKGP49619 791 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 TP53BP2Q13625 1128 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 LIPJQ5W064 366 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 FOXJ1Q92949 421 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 CCM2Q9BSQ5 444 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 COPS4Q9BT78 406 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 IL36AQ9UHA7 158 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 INTS6Q9UL03 887 aaKnown RBP14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 ANGPT4Q9Y264 503 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 TET1Q8NFU7 2136 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 SH3PXD2BA1X283 911 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 SYNDIG1LA6NDD5 238 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 AMD1P17707 334 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 GSTM2P28161 218 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 OR1E2P47887 323 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 TMED10P49755 219 aaKnown RBP14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 NUDT6P53370 316 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 HSD11B1LQ7Z5J1 315 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 KRT78Q8N1N4 520 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 PAPD5Q8NDF8 572 aaKnown RBP14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 PROX1Q92786 737 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 CPPED1Q9BRF8 314 aaPredicted RBP14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 MAGIXQ9H6Y5 334 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 ABCB10Q9NRK6 738 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 PCDH10Q9P2E7 1040 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 ZNF282Q9UDV7 671 aaPredicted RBP14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 PCDHGB3Q9Y5G1 929 aa14.47□□□□□ -0.09
UBE2D4-201ENST00000222402 TMX2-CTNND1H3BSU7 103 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 M0QX08 132 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 ZNF701M0R085 212 aaPredicted RBP14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 ADAMDEC1O15204 470 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 ITGA2P17301 1181 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 CDH3P22223 829 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 PRKAG1P54619 331 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 TEAD4Q15561 434 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 MCFD2Q8NI22 146 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 MYDGFQ969H8 173 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 UBE2E3Q969T4 207 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 SLC35A5Q9BS91 424 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 CCDC177Q9NQR7 707 aaPredicted RBP14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 TRNAU1APQ9NX07 287 aaKnown RBP14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 CEP350Q5VT06 3117 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 CARNS1A5YM72 827 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 NUAK1O60285 661 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 KRT75O95678 551 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 PCSK2P16519 638 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 DGKEP52429 567 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 MPP7Q5T2T1 576 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 SMYD1Q8NB12 490 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 GLYATL1Q969I3 302 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 CCDC115Q96NT0 180 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 SPHK2Q9NRA0 654 aa14.46□□□□□ -0.09
UBE2D4-201ENST00000222402 C1SP09871 688 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 CA5AP35218 305 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 RPL3P39023 403 aaKnown RBP14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 MANFP55145 182 aaKnown RBP14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 CDC42P60953 191 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 VBP1P61758 197 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 IFI44LQ53G44 452 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 ZSWIM9Q86XI8 627 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 SUSD6Q92537 303 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 SGCDQ92629 289 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 KLHL25Q9H0H3 589 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 ABCG2Q9UNQ0 655 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 CCL26Q9Y258 94 aa14.46□□□□□ -0.1
UBE2D4-201ENST00000222402 NYNRINQ9P2P1 1898 aaKnown RBP14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 ARHGEF33A8MVX0 844 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 KLK1P06870 262 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 BMP1P13497 986 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 CCL5P13501 91 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 CD36P16671 472 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 ZNF12P17014 697 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 CSNK1DP48730 415 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 GANABQ14697 944 aaKnown RBP14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 INAQ16352 499 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 METTL2BQ6P1Q9 378 aaKnown RBP14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 CPXM2Q8N436 756 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 CXorf40AQ8TE69 158 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 NTN4Q9HB63 628 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 ERVW-1Q9UQF0 538 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 ITM2BQ9Y287 266 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 PRKAB1Q9Y478 270 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 C6orf47O95873 294 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 C9P02748 559 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 IFNA8P32881 189 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 NKX3-2P78367 333 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 SPIN4Q56A73 249 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 KIAA1614Q5VZ46 1190 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 EIF3MQ7L2H7 374 aaKnown RBP14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 ALDH16A1Q8IZ83 802 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 LMNTD1Q8N9Z9 388 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 KLHL23Q8NBE8 558 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 OR10G2Q8NGC3 310 aa14.45□□□□□ -0.1
UBE2D4-201ENST00000222402 HUS1BQ8NHY5 278 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms