RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Dgat2l6A2ADU8 337 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm38392E9Q2A2 434 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp938E9Q9G3 579 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Hsd17b10O08756 261 aaKnown RBP9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 St3gal5O88829 414 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pax2P32114 414 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 MafP54843 370 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gpr65Q61038 337 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tmem130Q6NXM3 419 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Trim50Q810I2 483 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Susd6Q8BGE4 302 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tmem209Q8BRG8 561 aaKnown RBP9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 4932414N04RikQ8CEQ9 752 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Depdc1aQ8CIG0 804 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Acsl5Q8JZR0 683 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Glcci1Q8K3I9 537 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 SgtbQ8VD33 304 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fbxo33Q8VE08 562 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr1048Q8VGS2 320 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc3a1Q91WV7 685 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Syt17Q920M7 470 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nudt8Q9CR24 210 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Q9DAQ4 598 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tspan4Q9DCK3 238 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 NckipsdQ9ESJ4 714 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fezf2Q9ESP5 455 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PbkQ9JJ78 330 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Htatip2Q9Z2G9 242 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 4930563M21RikA0A1L1SUT5 578 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Glyatl3E9Q5L8 290 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fbxw28E9Q8A4 466 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm3402K7N5P2 326 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm3542K7N6U2 270 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 NlkO54949 527 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 FiglaO55208 194 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Wnt7bP28047 349 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 DcnP28654 354 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Atoh1P48985 351 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Clcn3P51791 818 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Map4k1P70218 827 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 SmsP97355 366 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nxpe2Q3U095 558 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tstd2Q3U269 495 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Garem1Q3UFT3 876 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ldlrad2Q3V0V0 142 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ptpn18Q61152 453 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 SrmQ64674 302 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 P4ha3Q6W3F0 542 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Syt16Q7TN83 639 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Otop1Q80VM9 600 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cpped1Q8BFS6 312 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Spata21Q8BHW6 681 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc41a1Q8BJA2 512 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rhbdd3Q8BP97 385 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pggt1bQ8BUY9 377 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ppp1r8Q8R3G1 351 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 LgalslQ8VED9 172 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr695Q8VFM3 315 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Oas1hQ8VI97 369 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pcdhb19Q91Y01 801 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nipsnap3bQ9CQE1 247 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Trappc2Q9CQP2 140 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zswim2Q9D9X6 631 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Padi1Q9Z185 662 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ccdc88cQ6VGS5 2009 aa9.46□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm7929A0A286YDV3 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 EXOC1LB9EK06 172 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm21977F6U3N7 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm8247F6VRJ8 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm8005F6YKY3 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm3015F6ZAP6 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm8212F6ZMY5 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm7954F7BAX1 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm8138F7BY56 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm8232F7CFJ3 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm17079F7D8Y4 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm8229K7N749 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm8165L7N218 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm8122L7N2C7 213 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gm17078M0QW51 211 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Gpx5P21765 221 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 HccsP53702 272 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Btg1P62325 171 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Vps72Q62481 368 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Mc2rQ64326 296 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 GapdhsQ64467 440 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Sec24dQ6NXL1 1032 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Rps27lQ6ZWY3 84 aaKnown RBP9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Arhgap11aQ80Y19 987 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 UstQ8BUB6 407 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Inpp5kQ8C5L6 468 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Olfr371Q8VGB8 312 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Fads1Q920L1 447 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 LiasQ99M04 373 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Nmnat1Q9EPA7 285 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 RhouQ9EQT3 261 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Pkmyt1Q9ESG9 490 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Dclk1Q9JLM8 756 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ambra1A2AH22 1300 aa9.46□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Kcnh4A2A5F7 1018 aa9.46□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms