RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Slc7a13Q91WN3 478 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 ChiaQ91XA9 473 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Spcs2Q9CYN2 226 aaKnown RBP8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Pbdc1Q9D0B6 198 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Uqcrc2Q9DB77 453 aaKnown RBP8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Nudt22Q9DD16 308 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Xylt2Q9EPL0 865 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Arr3Q9EQP6 381 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Cyp39a1Q9JKJ9 470 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Gyg1Q9R062 333 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Noc2lQ9WV70 747 aaKnown RBP8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Ltn1Q6A009 1767 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 NinQ61043 2035 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Trav5-4A0A075B652 114 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Aadacl2B2RWD2 401 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Rnf165E9QAU8 347 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm3633L7N233 213 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Cacng1O70578 223 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 RradO88667 308 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Myf6P15375 242 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Gpr12P35412 334 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Ccr2P51683 373 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Sox13Q04891 613 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Grid2ipQ0QWG9 1203 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Slc17a7Q3TXX4 560 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Wee2Q66JT0 555 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Dclk2Q6PGN3 756 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Paqr3Q6TCG8 311 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Comtd1Q8BIG7 262 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Fra10ac1Q8BP78 315 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 TdrpQ8C5P7 182 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 CrhQ8CIT0 187 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Commd1Q8K4M5 188 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 St7lQ8K4P7 559 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Plekhh3Q8VCE9 796 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Apobec3Q99J72 440 aaKnown RBP8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Tmem41aQ9D8U2 264 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Tm9sf1Q9DBU0 606 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Mllt1Q9ERL0 547 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 RangrfQ9JIB0 185 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Elf4Q9Z2U4 655 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 PpigA2AR02 752 aaKnown RBP8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Skint2A7XUX6 400 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 4930444G20RikD3Z741 495 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Herc6F2Z461 1003 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Pcdh1F7BJK1 1077 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm3138K7N754 218 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Atf6bO35451 699 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Angpt2O35608 496 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 CcnoP0C242 352 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Rpl7aP12970 266 aaKnown RBP8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Zfp60P16374 707 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr6P34986 316 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 TktP40142 623 aaKnown RBP8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 PtgirP43252 415 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 S100a1P56565 94 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Vsnl1P62761 191 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Wbp1P97764 304 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Dlk1Q09163 385 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Ckap2Q3V1H1 664 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Luc7l3Q5SUF2 432 aaKnown RBP8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Med22Q62276 200 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Serpinb9fQ80UK5 377 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Lrrtm2Q8BGA3 515 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Zmat4Q8BZ94 229 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Ppp1r3bQ8C767 284 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Apol10aQ8CCA5 318 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr781Q8VFZ8 311 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr131Q8VGC8 314 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Tom1l1Q923U0 474 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Gid4Q9CPY6 217 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Mcur1Q9CXD6 340 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 BlvraQ9CY64 295 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Tmed10Q9D1D4 219 aaKnown RBP8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Tmem35aQ9D328 167 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Clca1Q9D7Z6 913 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 AplfQ9D842 499 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 1700018B08RikQ9DA83 213 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Vmn1r44Q9EQ47 310 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Moap1Q9ERH6 352 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Kcnq4Q9JK97 696 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Pex3Q9QXY9 372 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Rfc2Q9WUK4 349 aaKnown RBP8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Cldn8Q9Z260 225 aa8.78□□□□□ -1
Upf3b-201ENSMUST00000076265 Slc16a6B1AT66 607 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Ifi213D3Z5G0 586 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr370E9Q848 314 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Oaz2O08608 189 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Bak1O08734 209 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Arl6O88848 186 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 F2P19221 618 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Csf2rb2P26954 878 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Eif4ebp2P70445 120 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Cdr2P97817 455 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Znf367Q0VDT2 340 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Nsun7Q14AW5 724 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Snx27Q3UHD6 539 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm648Q3UJ22 213 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 PfplQ5RKV8 702 aa8.77□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr10Q60883 311 aa8.77□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms