RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Armc1Q9D7A8 282 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Wdr53Q9DB94 358 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cts6Q9ET52 334 aa8.41□□□□□ -1.06
Trim39-201ENSMUST00000042717 Arhgap36B1AUC7 590 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Arl9F7BE40 171 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Vmn2r12L7N217 831 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ephb6O08644 1014 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nrp2O35375 931 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hoxb9P20615 250 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 UoxP25688 303 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gfi1P70338 423 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Padi2Q08642 673 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ccdc138Q0VF22 680 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Spata6Q3U6K5 488 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Q3USZ8 430 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Galnt7Q80VA0 657 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cxcr1Q810W6 351 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Wwp1Q8BZZ3 918 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Eif3lQ8QZY1 564 aaKnown RBP8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Q91W34 466 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rnf144aQ925F3 292 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Scd3Q99PL7 359 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Klhl35Q9CZ49 574 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Q9D1Z2 194 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 ErmapQ9JLN5 566 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Socs6Q9JLY0 533 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ssc4dA1L0T3 586 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Faap100A2ACJ2 879 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fam217bA2AJW5 387 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr1200A2ATJ4 336 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm20547B8JJN0 1276 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 CfbP04186 761 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Bmp6P20722 510 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ly6fP35460 134 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rps13P62301 151 aaKnown RBP8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cdk15Q3V3A1 433 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tbccd1Q640P7 552 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pcdh8Q7TSK3 1070 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 PeloQ80X73 385 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 D3Ertd751eQ8BGN2 192 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Asrgl1Q8C0M9 326 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hmgcs1Q8JZK9 520 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nudt13Q8JZU0 352 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Adgrg1Q8K209 687 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Calhm5Q8R100 309 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Micu1Q8VCX5 477 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 MecrQ9DCS3 373 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pkmyt1Q9ESG9 490 aa8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Clic1Q9Z1Q5 241 aaKnown RBP8.4□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cep295Q8BQ48 2412 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 L3mbtl4B1B1A0 621 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Izumo4D3Z690 227 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 NumblO08919 604 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mtnd3P03899 115 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 GsnP13020 780 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ceacam1P31809 521 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 MazP56671 477 aaKnown RBP8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Trpv5P69744 723 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Il11ra2P70225 432 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pld2P97813 933 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 CtrcQ3SYP2 268 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tex24Q5DP50 351 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Xlr3aQ60595 226 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr12Q60894 333 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vdac3Q60931 283 aaKnown RBP8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 DgkbQ6NS52 802 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Il20raQ6PHB0 546 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ap4e1Q80V94 1122 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pi15Q8BS03 258 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Banf2Q8BVR0 90 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cmtr2Q8BWQ4 767 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vps37aQ8CHS8 397 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Stx5Q8K1E0 355 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ddx52Q8K301 598 aaKnown RBP8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ceacam2Q925P2 520 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tnip2Q99JG7 430 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gmpr2Q99L27 348 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tex19.1Q99MV2 351 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 2010109A12RikQ9D875 119 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ebna1bp2Q9D903 306 aaKnown RBP8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pfn3Q9DAD6 137 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc34a2Q9DBP0 697 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tlr4Q9QUK6 835 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 RpgrQ9R0X5 1001 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tbk1Q9WUN2 729 aa8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 Keap1Q9Z2X8 624 aaKnown RBP8.4□□□□□ -1.07
Trim39-201ENSMUST00000042717 A0A286YDP4 300 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lgr4A2ARI4 951 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Itih4A6X935 942 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zfp599E9PWP1 548 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 1600015I10RikE9Q745 711 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Polr2jO08740 117 aaKnown RBP8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Serpinb9eO08806 377 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tspan6O70401 245 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dab2P98078 766 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Krt2Q3TTY5 707 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cyp2j13Q3UNV4 503 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 GalpQ810H5 117 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Atl1Q8BH66 558 aa8.39□□□□□ -1.07
Trim39-201ENSMUST00000042717 Apbb3Q8R1C9 486 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms