RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CSE1LP55060 971 aaKnown RBP17.11■□□□□ 0.33
CLN6-212ENST00000636020 NUP107P57740 925 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
CLN6-212ENST00000636020 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 DEFB113Q30KQ7 82 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 EMC4Q5J8M3 183 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 ARSKQ6UWY0 536 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 ACAD11Q709F0 780 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 VRK3Q8IV63 474 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 GOT1L1Q8NHS2 421 aaPredicted RBP17.11■□□□□ 0.33
CLN6-212ENST00000636020 M1APQ8TC57 530 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 ZFYVE21Q9BQ24 234 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 GBA3Q9H227 469 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 IMPACTQ9P2X3 320 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 SLC39A10Q9ULF5 831 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 RUVBL1Q9Y265 456 aaKnown RBP17.11■□□□□ 0.33
CLN6-212ENST00000636020 TLN2Q9Y4G6 2542 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 OR2A25A4D2G3 310 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 FAM171A2A8MVW0 826 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 SLC25A12O75746 678 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 LY6G6DO95868 133 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 KRT1P04264 644 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 RPN2P04844 631 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 TYRO3Q06418 890 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 ITIH4Q14624 930 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 MESDQ14696 234 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 ZNF468Q5VIY5 522 aaPredicted RBP17.1■□□□□ 0.33
CLN6-212ENST00000636020 DENND5AQ6IQ26 1287 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 MFSD7Q6UXD7 560 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 PAMR1Q6UXH9 720 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 UNC5DQ6UXZ4 953 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 PACS1Q6VY07 963 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 ARHGEF39Q8N4T4 335 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 POGLUT1Q8NBL1 392 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 OR2L3Q8NG85 312 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 CFAP61Q8NHU2 1237 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 PWWP2AQ96N64 755 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 MMP25Q9NPA2 562 aa17.1■□□□□ 0.33
CLN6-212ENST00000636020 A0A0A6YYC8 382 aaPredicted RBP17.09■□□□□ 0.33
CLN6-212ENST00000636020 I3L1I5 382 aaPredicted RBP17.09■□□□□ 0.33
CLN6-212ENST00000636020 TFECO14948 347 aaPredicted RBP17.09■□□□□ 0.33
CLN6-212ENST00000636020 ATE1O95260 518 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 CYC1P08574 325 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 TFEBP19484 476 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 MAT1AQ00266 395 aaKnown RBP17.09■□□□□ 0.33
CLN6-212ENST00000636020 EXT1Q16394 746 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 HKDC1Q2TB90 917 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 CMPK2Q5EBM0 449 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 FIGNQ5HY92 759 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 GARNL3Q5VVW2 1013 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 LRRC8BQ6P9F7 803 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 ZNF227Q86WZ6 799 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 KRTAP1-3Q8IUG1 177 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 LGI4Q8N135 537 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 SLC5A8Q8N695 610 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 OR2A1Q8NGT9 310 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 CDKN2AIPNLQ96HQ2 116 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 RAB11FIP5Q9BXF6 653 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 SYNPO2LQ9H987 977 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 PLSCR2Q9NRY7 297 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 NLE1Q9NVX2 485 aaPredicted RBP17.09■□□□□ 0.33
CLN6-212ENST00000636020 C19orf25Q9UFG5 118 aaPredicted RBP17.09■□□□□ 0.33
CLN6-212ENST00000636020 NENFQ9UMX5 172 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 ALG6Q9Y672 507 aa17.09■□□□□ 0.33
CLN6-212ENST00000636020 CDK2AP1O14519 115 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 CST8O60676 142 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 RAF1P04049 648 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 SERPING1P05155 500 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 H2AFZP0C0S5 128 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 OR56A5P0C7T3 313 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 PCSK6P29122 969 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 CCR7P32248 378 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 YBX1P67809 324 aaKnown RBP17.08■□□□□ 0.32
CLN6-212ENST00000636020 TFDP2Q14188 446 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 H2AFVQ71UI9 128 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 CSNK1A1LQ8N752 337 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 QKIQ96PU8 341 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLN6-212ENST00000636020 DRC3Q9H069 523 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 ZNF407Q9C0G0 2248 aa17.08■□□□□ 0.32
CLN6-212ENST00000636020 ANK3Q12955 4377 aaKnown RBP17.07■□□□□ 0.32
CLN6-212ENST00000636020 HIVEP2P31629 2446 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 A0A1W2PPV9 198 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 SOWAHDA6NJG2 315 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 CDC40O60508 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLN6-212ENST00000636020 PRMT3O60678 531 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 GPC4O75487 556 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 CDKN2BP42772 138 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 KIR2DL3P43628 341 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 HSPA14Q0VDF9 509 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 SNTB1Q13884 538 aaKnown RBP17.07■□□□□ 0.32
CLN6-212ENST00000636020 LRRC38Q5VT99 294 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 CHSY3Q70JA7 882 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 ANKRD37Q7Z713 158 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 HMGCLL1Q8TB92 370 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 SYN2Q92777 582 aaPredicted RBP17.07■□□□□ 0.32
CLN6-212ENST00000636020 P3H4Q92791 437 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 DPH7Q9BTV6 452 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 CDCP1Q9H5V8 836 aa17.07■□□□□ 0.32
CLN6-212ENST00000636020 TRIM45Q9H8W5 580 aaPredicted RBP17.07■□□□□ 0.32
CLN6-212ENST00000636020 ARNT2Q9HBZ2 717 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms