RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 FKBP9O95302 570 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 HSPA4LO95757 839 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 MLYCDO95822 493 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 SERPINE1P05121 402 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 C1GALT1C1LP0DN25 315 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 THRAP10827 490 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 CDK4P11802 303 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 HRH2P25021 359 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 VARSP26640 1264 aaKnown RBP8.18□□□□□ -1.1
SGMS1-211ENST00000626236 ARL4DP49703 201 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 SEPHS1P49903 392 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 CCR8P51685 355 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 CLDN6P56747 220 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 NAA20P61599 178 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 IRF8Q02556 426 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 LCP2Q13094 533 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 CHIT1Q13231 466 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 RCN2Q14257 317 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 NAA25Q14CX7 972 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 CES4AQ5XG92 561 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 FCRL6Q6DN72 434 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 FIGLAQ6QHK4 219 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 BLOC1S3Q6QNY0 202 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 NXPE4Q6UWF7 544 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 SLCO4C1Q6ZQN7 724 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 PRSS42Q7Z5A4 293 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 B3GNT8Q7Z7M8 397 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 PAQR7Q86WK9 346 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 MYLK4Q86YV6 388 aaPredicted RBP8.18□□□□□ -1.1
SGMS1-211ENST00000626236 TRIM42Q8IWZ5 723 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 CARFQ8N187 725 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 C19orf47Q8N9M1 422 aaKnown RBP8.18□□□□□ -1.1
SGMS1-211ENST00000626236 RCBTB1Q8NDN9 531 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 ZUFSPQ96AP4 578 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 CNDP1Q96KN2 507 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 TRAPPC9Q96Q05 1148 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 RTKNQ9BST9 563 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 SHCBP1LQ9BZQ2 653 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF768Q9H5H4 540 aaKnown RBP8.18□□□□□ -1.1
SGMS1-211ENST00000626236 ACTR8Q9H981 624 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 PELI2Q9HAT8 420 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 MID1IP1Q9NPA3 183 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 TMEM184CQ9NVA4 438 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 SNX7Q9UNH6 387 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 PCDHB3Q9Y5E6 796 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 GVINP1Q7Z2Y8 2422 aa8.18□□□□□ -1.1
SGMS1-211ENST00000626236 PTPRBP23467 1997 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 RIF1Q5UIP0 2472 aaKnown RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 A0A1B0GTL3 188 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 FEZF1A0PJY2 475 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 DCDC2BA2VCK2 349 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 TMEM114B3SHH9 223 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 UBFD1O14562 309 aaKnown RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 TOX3O15405 576 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PRAMEF4O60810 478 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 LYPLA1O75608 230 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 CLDN9O95484 217 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ZBTB11O95625 1053 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 MT-CO3P00414 261 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 OTCP00480 354 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 CHRNGP07510 517 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 EBLN1P0CF75 366 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 GRK2P25098 689 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 GRK3P35626 688 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 SERPINB5P36952 375 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 SLC1A6P48664 564 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PDX1P52945 283 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 INHBCP55103 352 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PKNOX1P55347 436 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ERVPABLB-1P60509 514 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ABCE1P61221 599 aaKnown RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 CSNK1G2P78368 415 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 HSD11B2P80365 405 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 REEP5Q00765 189 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 GUCY1A3Q02108 690 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 BST1Q10588 318 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 TRAF3Q13114 568 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 STX3Q13277 289 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 DOC2AQ14183 400 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 SLBPQ14493 270 aaKnown RBP eCLIP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ZIC1Q15915 447 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 HIST2H2ACQ16777 129 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ARL13AQ5H913 290 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-211ENST00000626236 HES3Q5TGS1 186 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PRAMEF9Q5VWM5 478 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 CDCP2Q5VXM1 449 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 LIPJQ5W064 366 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ATG9BQ674R7 924 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ATG16L1Q676U5 607 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 HIST2H2AA3Q6FI13 130 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF425Q6IV72 752 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 GPRIN3Q6ZVF9 776 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 MILR1Q7Z6M3 343 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 SYVN1Q86TM6 617 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 CUZD1Q86UP6 607 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 FAM129CQ86XR2 697 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 PLD3Q8IV08 490 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 SLITRK4Q8IW52 837 aa8.17□□□□□ -1.1
SGMS1-211ENST00000626236 LSMEM2Q8N112 164 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms