RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CASP2P42575 452 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 PDX1P52945 283 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 GALNT1Q10472 559 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 TRAF3Q13114 568 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 CAMK2BQ13554 666 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 RCN2Q14257 317 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 TBCCQ15814 346 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 PRAMEF9Q5VWM5 478 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 CES4AQ5XG92 561 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 ATG9BQ674R7 924 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 ZNF425Q6IV72 752 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 NXPE4Q6UWF7 544 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 TMPRSS11BQ86T26 416 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 OR4K1Q8NGD4 311 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 OR52B6Q8NGF0 335 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 CKAP2Q8WWK9 683 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 ZUFSPQ96AP4 578 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 DPH7Q9BTV6 452 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 TMEM184CQ9NVA4 438 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 SNX7Q9UNH6 387 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 CHD8Q9HCK8 2581 aa19.06■□□□□ 0.64
PDLIM2-221ENST00000622702 PPP6CO00743 305 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 ANKRD34CP0C6C1 535 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 C1GALT1C1LP0DN25 315 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 THRAP10827 490 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 TSPAN8P19075 237 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 MAGP20916 626 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 CCR8P51685 355 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 CCNG1P51959 295 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 IRF8Q02556 426 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 CHIT1Q13231 466 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 CATSPEREQ5SY80 951 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 B3GNT8Q7Z7M8 397 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 SLITRK4Q8IW52 837 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 TRAPPC9Q96Q05 1148 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 PLCD4Q9BRC7 762 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 CHRNA10Q9GZZ6 450 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 MANSC1Q9H8J5 431 aa19.05■□□□□ 0.64
PDLIM2-221ENST00000622702 IGHV5-10-1A0A0J9YXX1 117 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 OR2A25A4D2G3 310 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 TRABD2BA6NFA1 517 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 H7BY64 318 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 SNUPNO95149 360 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 EBLN1P0CF75 366 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 PVRP15151 417 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 ST6GAL1P15907 406 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 ARRB2P32121 409 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 PKNOX1P55347 436 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 CSNK1G2P78368 415 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 RELAQ04206 551 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 BST1Q10588 318 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 STX3Q13277 289 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 RBBP7Q16576 425 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 XKR6Q5GH73 641 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 ARL13AQ5H913 290 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 CACHD1Q5VU97 1274 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 ATG16L1Q676U5 607 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 FIGLAQ6QHK4 219 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 PAQR7Q86WK9 346 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 FAM129CQ86XR2 697 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 KMT5CQ86Y97 462 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 LSMEM2Q8N112 164 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 L3MBTL4Q8NA19 623 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 AGAP11Q8TF27 550 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 ZNF75CPQ92670 426 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 GATA6Q92908 595 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 ATP6V1E2Q96A05 226 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 PTCD3Q96EY7 689 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 PRAP1Q96NZ9 151 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 EFCAB11Q9BUY7 163 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 ACTR8Q9H981 624 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 KLHL3Q9UH77 587 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 FREM2Q5SZK8 3169 aa19.04■□□□□ 0.64
PDLIM2-221ENST00000622702 IGHV5-51A0A0C4DH38 117 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 SLC9B1P1A6NJY1 282 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 UBFD1O14562 309 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 RASSF9O75901 435 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 CLDN9O95484 217 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ZBTB11O95625 1053 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ESRRBO95718 433 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 CCR10P46092 362 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 INHBCP55103 352 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ABCE1P61221 599 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ZFP36L1Q07352 338 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 TRA2AQ13595 282 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 DOC2AQ14183 400 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 GGTA1PQ4G0N0 100 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 LIPJQ5W064 366 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 FCRL6Q6DN72 434 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 RGS9BPQ6ZS82 235 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 GPRIN3Q6ZVF9 776 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ARHGAP22Q7Z5H3 698 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 C19orf47Q8N9M1 422 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 LRRC8CQ8TDW0 803 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 KLHL6Q8WZ60 621 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 GRAMD1AQ96CP6 724 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 MAGEB10Q96LZ2 347 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 MAGEB18Q96M61 343 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 TMEM74Q96NL1 305 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 EML4Q9HC35 981 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms