RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KRT6CP48668 564 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 HTR6P50406 440 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 ARFIP2P53365 341 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 OR1D5P58170 312 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 LAPTM5Q13571 262 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 E2F2Q14209 437 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 SGO1Q5FBB7 561 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 KIAA1614Q5VZ46 1190 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 SPESP1Q6UW49 350 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 CCDC121Q6ZUS5 278 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 TRIM73Q86UV7 250 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 CHCHD4Q8N4Q1 142 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 Q8N9G6 341 aaPredicted RBP17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 OR6C4Q8NGE1 309 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 C10orf82Q8WW14 230 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 CCDC74AQ96AQ1 378 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 PLCD4Q9BRC7 762 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 DPH7Q9BTV6 452 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 ELOVL6Q9H5J4 265 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 SLC6A20Q9NP91 592 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 SEMA4GQ9NTN9 838 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 BTBD3Q9Y2F9 522 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 PCDHGB2Q9Y5G2 931 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 PTGDR2Q9Y5Y4 395 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 U3KQA8 63 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 OTOGLQ3ZCN5 2332 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 DMDP11532 3685 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 IGKV1-8A0A0C4DH67 115 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 CPED1A4D0V7 1026 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 PIP5K1BO14986 540 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 GPR3P46089 330 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 PPP1CAP62136 330 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 HIST2H2ACQ16777 129 aaPredicted RBP17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 INAVAQ3KP66 663 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 HIST2H2AA3Q6FI13 130 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 EPGNQ6UW88 154 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 SCIMPQ6UWF3 145 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 FAM129CQ86XR2 697 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 KRT78Q8N1N4 520 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 C19orf60Q96EN9 201 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 AHCYL2Q96HN2 611 aaKnown RBP17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 AIF1LQ9BQI0 150 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 EBF4Q9BQW3 602 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 EDEM2Q9BV94 578 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 SPNS1Q9H2V7 528 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 TUBB1Q9H4B7 451 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 KLHL20Q9Y2M5 609 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 UNC13CQ8NB66 2214 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 ULK1O75385 1050 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 LINC00032P0C843 101 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 CXCR2P25025 360 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 GRK6P43250 576 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 IDH3AP50213 366 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 NR1D2Q14995 579 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 SLC5A12Q1EHB4 618 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 SLC9B1Q4ZJI4 515 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 NKAIN2Q5VXU1 208 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 FRG2Q64ET8 278 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 IRGCQ6NXR0 463 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 MED27Q6P2C8 311 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 GUSBP11Q6P575 273 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 HOMEZQ8IX15 550 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 MTFMTQ96DP5 389 aaKnown RBP17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 FRG2BQ96QU4 278 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 HBEGFQ99075 208 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 KCNH6Q9H252 994 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 ACTR5Q9H9F9 607 aaPredicted RBP17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 MEAF6Q9HAF1 191 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 PRM3Q9NNZ6 103 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 PFDN4Q9NQP4 134 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 FARSBQ9NSD9 589 aaKnown RBP17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 TMEM184CQ9NVA4 438 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 POMT2Q9UKY4 750 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 ZNF490Q9ULM2 529 aaPredicted RBP17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 ARL2BPQ9Y2Y0 163 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 PCDHGA11Q9Y5H2 935 aa17.13■□□□□ 0.33
PTCHD3-202ENST00000622555 ASCC3Q8N3C0 2202 aaKnown RBP17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 MYO15AQ9UKN7 3530 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 MDC1Q14676 2089 aaKnown RBP17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 IGHV1OR21-1A0A087WYE8 117 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 GOLGA8QA0A0J9YX86 632 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 GOLGA8OA6NCC3 632 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 GOLGA8NF8WBI6 632 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 H0YIV9 168 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 DLL1O00548 723 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 FKBP9O95302 570 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 PCNAP12004 261 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 HRH2P25021 359 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 GRIA3P42263 894 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 NEK2P51955 445 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 INHBCP55103 352 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 CSNK1G2P78368 415 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 DAB2P98082 770 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 REEP5Q00765 189 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 ABRAXAS2Q15018 415 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 CSRP2Q16527 193 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 AMZ1Q400G9 498 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 ZNF740Q8NDX6 193 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms