RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PMPCBO75439 489 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 MAD2L1BPQ15013 274 aaPredicted RBP21.29■■□□□ 1
POLR2J3-220ENST00000613744 PTCRAQ6ISU1 281 aaPredicted RBP21.29■■□□□ 1
POLR2J3-220ENST00000613744 PARM1Q6UWI2 310 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 RAVER1Q8IY67 606 aaKnown RBP21.29■■□□□ 1
POLR2J3-220ENST00000613744 GALNT6Q8NCL4 622 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 PLD4Q96BZ4 506 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 CDADC1Q9BWV3 514 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 RNF6Q9Y252 685 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 NEUROG3Q9Y4Z2 214 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 GMPPBQ9Y5P6 360 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 DENND4AQ7Z401 1863 aa21.29■■□□□ 1
POLR2J3-220ENST00000613744 E9PAM4 449 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 CXCR6O00574 342 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 GREM1O60565 184 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 MAFKO60675 156 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 PFKLP17858 780 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 PKLRP30613 574 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 BNC1Q01954 994 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 LAPTM5Q13571 262 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 GPR50Q13585 617 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 PROX2Q3B8N5 592 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 YIF1BQ5BJH7 314 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 ANKRD34AQ69YU3 496 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 KDELC1Q6UW63 502 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 PIM3Q86V86 326 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 BPHLQ86WA6 291 aaPredicted RBP21.28■■□□□ 1
POLR2J3-220ENST00000613744 BBS7Q8IWZ6 715 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 SLC22A15Q8IZD6 547 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 PAF1Q8N7H5 531 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 FGF14Q92915 247 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 RMDN1Q96DB5 314 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 KXD1Q9BQD3 176 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 MPP6Q9NZW5 540 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 HELZP42694 1942 aaKnown RBP21.28■■□□□ 1
POLR2J3-220ENST00000613744 HMX3A6NHT5 357 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 YES1P07947 543 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 IL9P15248 144 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 NUDT1P36639 197 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 RPS5P46782 204 aaKnown RBP21.28■■□□□ 1
POLR2J3-220ENST00000613744 MLLT6P55198 1093 aaPredicted RBP21.28■■□□□ 1
POLR2J3-220ENST00000613744 FCHO2Q0JRZ9 810 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 GBX1Q14549 363 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 LEXMQ3ZCV2 418 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 SPANXN2Q5MJ10 180 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 NADSYN1Q6IA69 706 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 ARHGAP12Q8IWW6 846 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 FNDC5Q8NAU1 212 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 RPP25Q9BUL9 199 aaKnown RBP21.28■■□□□ 1
POLR2J3-220ENST00000613744 REXO4Q9GZR2 422 aaKnown RBP21.28■■□□□ 1
POLR2J3-220ENST00000613744 ZBTB20Q9HC78 741 aaPredicted RBP21.28■■□□□ 1
POLR2J3-220ENST00000613744 SYTL2Q9HCH5 934 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 STMN3Q9NZ72 180 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 NDRG4Q9ULP0 352 aaKnown RBP21.28■■□□□ 1
POLR2J3-220ENST00000613744 PKP3Q9Y446 797 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 LYVE1Q9Y5Y7 322 aa21.28■■□□□ 1
POLR2J3-220ENST00000613744 MROH6A6NGR9 719 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 C2CD4DB7Z1M9 353 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 DFFAO00273 331 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 DSCR3O14972 297 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 ICMTO60725 284 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 UGT2B17O75795 530 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 RPLP0P05388 317 aaKnown RBP21.27■■□□□ 1
POLR2J3-220ENST00000613744 HLA-DQB2P05538 268 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 ITGA2P17301 1181 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 FCARP24071 287 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 UGT2B15P54855 530 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 WNT3AP56704 352 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 CYP4F3Q08477 520 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 TBCEQ15813 527 aaPredicted RBP21.27■■□□□ 1
POLR2J3-220ENST00000613744 ZNF77Q15935 545 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 TOR1AIP1Q5JTV8 583 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 ARHGAP36Q6ZRI8 547 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 CHPFQ8IZ52 775 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 CELF5Q8N6W0 485 aaKnown RBP21.27■■□□□ 1
POLR2J3-220ENST00000613744 PSD4Q8NDX1 1056 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 GPR150Q8NGU9 434 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 MYEOVQ96EZ4 313 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 ZFYVE19Q96K21 471 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 DHRS9Q9BPW9 319 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 GON7Q9BXV9 100 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 PLA2G2FQ9BZM2 168 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 DERL2Q9GZP9 239 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 LINC00597Q9H2U6 94 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 SEMA4BQ9NPR2 832 aaPredicted RBP21.27■■□□□ 1
POLR2J3-220ENST00000613744 BTBD3Q9Y2F9 522 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 PCDHGB2Q9Y5G2 931 aa21.27■■□□□ 1
POLR2J3-220ENST00000613744 HEPACAM2A8MVW5 462 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 KLK8O60259 260 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 TSPAN3O60637 253 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 SEC22BO75396 215 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 PRKACGP22612 351 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 SLC11A2P49281 568 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 PON2Q15165 354 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 FBXO43Q4G163 708 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 KDM4DQ6B0I6 523 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 SYVN1Q86TM6 617 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 CHCHD4Q8N4Q1 142 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 FLCNQ8NFG4 579 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 OR56A4Q8NGH8 313 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms