RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LRRC32Q14392 662 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ANKRD54Q6NXT1 300 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 C8orf59Q8N0T1 100 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 UMODL1-AS1Q8N2C9 162 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 KCNN1Q92952 543 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 HSPA12BQ96MM6 686 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 MRPL57Q9BQC6 102 aaKnown RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ADPRHL2Q9NX46 363 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 TAC3Q9UHF0 121 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 GRID2O43424 1007 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 NOBOXO60393 691 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 TNFRSF21O75509 655 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 F11P03951 625 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 C6P13671 934 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 SCNN1AP37088 669 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 IL12RB1P42701 662 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ALDH3B2P48448 385 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF805Q5CZA5 627 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 OTUD1Q5VV17 481 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 HLA-DQA1Q5Y7H0 255 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 FAM91A1Q658Y4 838 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 CAPN13Q6MZZ7 669 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 CERS6Q6ZMG9 384 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 IQCF2Q8IXL9 164 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 CLP1Q92989 425 aaKnown RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ZHX1-C8orf76Q96EF9 292 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 MYEOVQ96EZ4 313 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 NECTIN4Q96NY8 510 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF347Q96SE7 839 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 KCTD14Q9BQ13 255 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 KLF16Q9BXK1 252 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 UBE2ZQ9H832 354 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF490Q9ULM2 529 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 POLR3HQ9Y535 204 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 PLXNB2O15031 1838 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 A0A1W2PQ72 361 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 NPIPB15A6NHN6 443 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 GLOD5A6NK44 160 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 RNGTTO60942 597 aaKnown RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ENDOUP21128 410 aaKnown RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ID2Q02363 134 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 SPESP1Q6UW49 350 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 CUZD1Q86UP6 607 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 ARMC8Q8IUR7 673 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 PPM1MQ96MI6 270 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 SORT1Q99523 831 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 TMEM246Q9BRR3 403 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 TTYH2Q9BSA4 534 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 DHRS4Q9BTZ2 278 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 FAM124BQ9H5Z6 455 aaPredicted RBP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 KCNK12Q9HB15 430 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 MAGEE1Q9HCI5 957 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 UCKL1Q9NWZ5 548 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.54□□□□□ -0.72
FAM3A-221ENST00000612856 TRAF6Q9Y4K3 522 aa10.54□□□□□ -0.72
FAM3A-221ENST00000612856 DOCK8Q8NF50 2099 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 TMEM189-UBE2V1I3L0A0 370 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 AZIN1O14977 448 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 PGLSO95336 258 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 CHRNB1P11230 501 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF37AP17032 561 aaPredicted RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 IDUAP35475 653 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 ARRB1P49407 418 aaPredicted RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 REP15Q6BDI9 236 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 RFPL4BQ6ZWI9 263 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 SNX20Q7Z614 316 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 GALNT10Q86SR1 603 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 ADGRG2Q8IZP9 1017 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 BDH2Q9BUT1 245 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 SLC25A23Q9BV35 468 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 OR10H1Q9Y4A9 318 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 MGAMO43451 1857 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 SLC7A4O43246 635 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 TMCC2O75069 709 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 JUNP05412 331 aaKnown RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 CAPGP40121 348 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 CSNK1EP49674 416 aaKnown RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 AGTR2P50052 363 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 TRAF3Q13114 568 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 TAZQ16635 292 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 CCNYL2Q5T2Q4 361 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 CDH24Q86UP0 819 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 FAM110BQ8TC76 370 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 CENPIQ92674 756 aaPredicted RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 TOE1Q96GM8 510 aaKnown RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 LHPPQ9H008 270 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 CTPS2Q9NRF8 586 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 TOR4AQ9NXH8 423 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 BTBD3Q9Y2F9 522 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 MTF2Q9Y483 593 aaPredicted RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 PCDHGA7Q9Y5G6 932 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 HNRNPCL2B2RXH8 293 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 E7ESA3 106 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 MLNP12872 115 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 AZGP1P25311 298 aaKnown RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 PGDP52209 483 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 CSTF1Q05048 431 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms