RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TAS2R39P59534 338 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 GPX6P59796 221 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 TSTA3Q13630 321 aaPredicted RBP12.45□□□□□ -0.42
USE1-207ENST00000596136 SLC9A5Q14940 896 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 TRADDQ15628 312 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 MUM1Q2TAK8 710 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 PRAMEF13Q5VWM6 474 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 LCTLQ6UWM7 567 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 SBSNQ6UWP8 590 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 ZDHHC24Q6UX98 284 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 MBOAT1Q6ZNC8 495 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 ATG14Q6ZNE5 492 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 MRGPREQ86SM8 312 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 TMEM151BQ8IW70 566 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 NKAPQ8N5F7 415 aaKnown RBP12.45□□□□□ -0.42
USE1-207ENST00000596136 OR56A3Q8NH54 315 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.45□□□□□ -0.42
USE1-207ENST00000596136 MVB12AQ96EY5 273 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 HIST1H2AHQ96KK5 128 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 SPSB2Q99619 263 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 HIST1H2AJQ99878 128 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 H2AFJQ9BTM1 129 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 POPDC3Q9HBV1 291 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 ACSS2Q9NR19 701 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 PCDHGB7Q9Y5F8 929 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 NBASA2RRP1 2371 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 SPENQ96T58 3664 aaKnown RBP12.44□□□□□ -0.42
USE1-207ENST00000596136 TCRBV9S1A1TA0A576 114 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 FAM159BA6NKW6 160 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 CXorf49A8MYA2 514 aaPredicted RBP12.44□□□□□ -0.42
USE1-207ENST00000596136 H7BY64 318 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 TXNDC9O14530 226 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 HAT1O14929 419 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 IGHEP01854 428 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 PDGFAP04085 211 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 EIF2S1P05198 315 aaKnown RBP12.44□□□□□ -0.42
USE1-207ENST00000596136 MMP11P24347 488 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 OR1D4P47884 311 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 CSNK1G2P78368 415 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 POU4F1Q01851 419 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 GUCY2DQ02846 1103 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 CKAP4Q07065 602 aaKnown RBP12.44□□□□□ -0.42
USE1-207ENST00000596136 CHAF1BQ13112 559 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 NAE1Q13564 534 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 ATP1A4Q13733 1029 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 PPP1R3AQ16821 1122 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 THEMIS2Q5TEJ8 643 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 C3orf62Q6ZUJ4 267 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 PPP1R32Q7Z5V6 425 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 PTRH1Q86Y79 214 aaKnown RBP12.44□□□□□ -0.42
USE1-207ENST00000596136 DTWD1Q8N5C7 304 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 CSNK1A1LQ8N752 337 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 ABHD11Q8NFV4 315 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 ATL1Q8WXF7 558 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 FBXL8Q96CD0 374 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 THAP11Q96EK4 314 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 VPS39Q96JC1 886 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 C16orf45Q96MC5 204 aaPredicted RBP12.44□□□□□ -0.42
USE1-207ENST00000596136 PRAP1Q96NZ9 151 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 SARGQ9BW04 601 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 TRIM54Q9BYV2 358 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 ATG10Q9H0Y0 220 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 ZNF304Q9HCX3 659 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 NXT1Q9UKK6 140 aaKnown RBP12.44□□□□□ -0.42
USE1-207ENST00000596136 IKZF3Q9UKT9 509 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 CDC14AQ9UNH5 594 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 RUVBL1Q9Y265 456 aaKnown RBP12.44□□□□□ -0.42
USE1-207ENST00000596136 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
USE1-207ENST00000596136 TNRC6AQ8NDV7 1962 aaKnown RBP12.43□□□□□ -0.42
USE1-207ENST00000596136 NUP210LQ5VU65 1888 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 TUBB4AP04350 444 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 NR1D1P20393 614 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 OTX2P32243 289 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 SLC26A3P40879 764 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 CASRP41180 1078 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 CCL11P51671 97 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 FOXL2P58012 376 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 RPS15AP62244 130 aaKnown RBP12.43□□□□□ -0.42
USE1-207ENST00000596136 CDKL1Q00532 357 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 KLRB1Q12918 225 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 FAM53BQ14153 422 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 WHAMMP3Q1A5X7 153 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 HKDC1Q2TB90 917 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 DCAF10Q5QP82 559 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 CAPN13Q6MZZ7 669 aaPredicted RBP12.43□□□□□ -0.42
USE1-207ENST00000596136 ASB18Q6ZVZ8 466 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 PRICKLE2Q7Z3G6 844 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 VN1R4Q7Z5H5 301 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 C17orf64Q86WR6 236 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 CEP97Q8IW35 865 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 OR4K1Q8NGD4 311 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 CDKL2Q92772 493 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 RERGQ96A58 199 aaPredicted RBP12.43□□□□□ -0.42
USE1-207ENST00000596136 TM4SF19Q96DZ7 209 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 FER1L6-AS2Q96M78 137 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 OR4K3Q96R72 315 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 CPNE1Q99829 537 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 HAUS8Q9BT25 410 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 LRRC1Q9BTT6 524 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 SLC25A23Q9BV35 468 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms