RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 RFX4Q33E94 735 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 CPZQ66K79 652 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 TMEM179BQ7Z7N9 219 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 HDAC2Q92769 488 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 DTD2Q96FN9 168 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 RAD9AQ99638 391 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 AMBRA1Q9C0C7 1298 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ADNPQ9H2P0 1102 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 EPHX3Q9H6B9 360 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ATXN10Q9UBB4 475 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 RPS6KA6Q9UK32 745 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 CDC14AQ9UNH5 594 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 H3BM21 787 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 SCAMP2O15127 329 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 SCN2BO60939 215 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 CPNE6O95741 557 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 GPX2P18283 190 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 DCKP27707 260 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 PNLIPRP1P54315 467 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 RAD23AP54725 363 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 KCNAB2Q13303 367 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 VMACQ2NL98 169 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 ZZZ3Q8IYH5 903 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 PGBD3Q8N328 593 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 ARL10Q8N8L6 244 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 COQ10AQ96MF6 247 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 DUSP26Q9BV47 211 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 ZCCHC2Q9C0B9 1178 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 KCNE2Q9Y6J6 123 aa16.02■□□□□ 0.16
PRKCSH-217ENST00000592741 NPC1O15118 1278 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 ADH1CP00326 375 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 PRNPP04156 253 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 CDK4P11802 303 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 PDHA2P29803 388 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 HPCAL1P37235 193 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 PIGAP37287 484 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 PPP1R8Q12972 351 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 SPIN4Q56A73 249 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 ZNF697Q5TEC3 545 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 GPR107Q5VW38 600 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 SHQ1Q6PI26 577 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 TMEM26Q6ZUK4 368 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 CHST15Q7LFX5 561 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 C1orf52Q8N6N3 182 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 CELF5Q8N6W0 485 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 OR10Q1Q8NGQ4 319 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 REPS1Q96D71 796 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 CXXC1Q9P0U4 656 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 BLOC1S6Q9UL45 172 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 MRPS23Q9Y3D9 190 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 NOL3O60936 208 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 ABCB7O75027 752 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 ANXA4P09525 319 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 LAMP1P11279 417 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 JUNBP17275 347 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 CTBSQ01459 385 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 PPIGQ13427 754 aaKnown RBP eCLIP16.01■□□□□ 0.151e-8■■■□□ 17.7
PRKCSH-217ENST00000592741 SKIV2LQ15477 1246 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 SF1Q15637 639 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 BCL7AQ4VC05 210 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 TCEAL5Q5H9L2 206 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 CPTPQ5TA50 214 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 MED27Q6P2C8 311 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 NLRP8Q86W28 1048 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 C12orf40Q86WS4 652 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 CLECL1Q8IZS7 167 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 FBXO15Q8NCQ5 510 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 OR7G3Q8NG95 312 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 TBC1D20Q96BZ9 403 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 C11orf24Q96F05 449 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 CNDP2Q96KP4 475 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 PCDHB11Q9Y5F2 797 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 PCDHGA8Q9Y5G5 932 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 U3KQV3 271 aa16.01■□□□□ 0.15
PRKCSH-217ENST00000592741 LOC100130705A0A1B0GUX0 176 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 HOXC11O43248 304 aaPredicted RBP16■□□□□ 0.15
PRKCSH-217ENST00000592741 B4GAT1O43505 415 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 TLL1O43897 1013 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 KCNK5O95279 499 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 C1orf105O95561 183 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 ETHE1O95571 254 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 IL7RP16871 459 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 PRKACGP22612 351 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 CRHBPP24387 322 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 CCR3P51677 355 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 GABARAPL2P60520 117 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 RAE1P78406 368 aaKnown RBP16■□□□□ 0.15
PRKCSH-217ENST00000592741 TOP3AQ13472 1001 aaPredicted RBP16■□□□□ 0.15
PRKCSH-217ENST00000592741 ZC3H12BQ5HYM0 836 aaKnown RBP16■□□□□ 0.15
PRKCSH-217ENST00000592741 ANKRD34AQ69YU3 496 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 CAPN13Q6MZZ7 669 aaPredicted RBP16■□□□□ 0.15
PRKCSH-217ENST00000592741 ANKRD26P1Q6NSI1 321 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 GPR155Q7Z3F1 870 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 R3HCC1LQ7Z5L2 792 aaKnown RBP16■□□□□ 0.15
PRKCSH-217ENST00000592741 TMPRSS11BQ86T26 416 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 CHDHQ8NE62 594 aaPredicted RBP16■□□□□ 0.15
PRKCSH-217ENST00000592741 VPS37AQ8NEZ2 397 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 VN1R2Q8NFZ6 395 aa16■□□□□ 0.15
PRKCSH-217ENST00000592741 HUS1BQ8NHY5 278 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms