RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 FERD3LQ96RJ6 166 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 TBC1D10AQ9BXI6 508 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 KIR3DX1Q9H7L2 352 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 NOL11Q9H8H0 719 aaKnown RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 ACTR8Q9H981 624 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 UCK1Q9HA47 277 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 PNPOQ9NVS9 261 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 LRIT1Q9P2V4 623 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 HEY2Q9UBP5 337 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 ADGRE2Q9UHX3 823 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 ZDHHC2Q9UIJ5 367 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 ZFP69BQ9UJL9 534 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 WASF3Q9UPY6 502 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
VMP1-202ENST00000585847 SNRNP200O75643 2136 aaKnown RBP12.2□□□□□ -0.46
VMP1-202ENST00000585847 SPEGQ15772 3267 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 ASPMQ8IZT6 3477 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 SPAARA0A1B0GVQ0 90 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 A0A1W2PQM1 296 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 CPED1A4D0V7 1026 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 LILRA5A6NI73 299 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 SLC28A1O00337 649 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 HYAL3O43820 417 aaPredicted RBP12.19□□□□□ -0.46
VMP1-202ENST00000585847 SLC16A8O95907 504 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 VIPP01282 170 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 KITP10721 976 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 CXCR2P25025 360 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 IMPA1P29218 277 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 HMOX2P30519 316 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 SHMT2P34897 504 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 OR1D5P58170 312 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 PHEXP78562 749 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 ABATP80404 500 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 SIM1P81133 766 aaPredicted RBP12.19□□□□□ -0.46
VMP1-202ENST00000585847 DAB2P98082 770 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 IFT88Q13099 833 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 TRAF3Q13114 568 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 PRKG2Q13237 762 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 GPR18Q14330 331 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 TRIP6Q15654 476 aaKnown RBP12.19□□□□□ -0.46
VMP1-202ENST00000585847 LCTLQ6UWM7 567 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 SPATA19Q7Z5L4 167 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 SYTL1Q8IYJ3 562 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 LMNTD1Q8N9Z9 388 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 CFAP61Q8NHU2 1237 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 METTL6Q8TCB7 284 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 TWIST2Q8WVJ9 160 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 GATA6Q92908 595 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 SLC22A18Q96BI1 424 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 CXorf40BQ96DE9 158 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 ERP27Q96DN0 273 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 CDC6Q99741 560 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 MYLK2Q9H1R3 596 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 ZBTB26Q9HCK0 441 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 SEMA4BQ9NPR2 832 aaPredicted RBP12.19□□□□□ -0.46
VMP1-202ENST00000585847 NMRK1Q9NWW6 199 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 OR6C2Q9NZP2 312 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 PPT2Q9UMR5 302 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 DYRK1BQ9Y463 629 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 NEUROG3Q9Y4Z2 214 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 DNAJC15Q9Y5T4 150 aa12.19□□□□□ -0.46
VMP1-202ENST00000585847 PCM1Q15154 2024 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 PTPRBP23467 1997 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 DYTNA2CJ06 578 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 H0YIV9 168 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 UBFD1O14562 309 aaKnown RBP12.18□□□□□ -0.46
VMP1-202ENST00000585847 RGS14O43566 566 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 JUPP14923 745 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 SERPINB3P29508 390 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 AGTR2P50052 363 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 CDH13P55290 713 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 STX1BP61266 288 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 TBPL1P62380 186 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 CCL7P80098 99 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 CSTF3Q12996 717 aaKnown RBP12.18□□□□□ -0.46
VMP1-202ENST00000585847 KRT33BQ14525 404 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 HERC3Q15034 1050 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 GSTA3Q16772 222 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 ZXDCQ2QGD7 858 aaPredicted RBP12.18□□□□□ -0.46
VMP1-202ENST00000585847 UGT3A2Q3SY77 523 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 XKR7Q5GH72 579 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 GRHL2Q6ISB3 625 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 TMPRSS9Q7Z410 1059 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 SPRED1Q7Z699 444 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 SYVN1Q86TM6 617 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 THOC6Q86W42 341 aaKnown RBP12.18□□□□□ -0.46
VMP1-202ENST00000585847 CPSF7Q8N684 471 aaKnown RBP12.18□□□□□ -0.46
VMP1-202ENST00000585847 SNX31Q8N9S9 440 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 OR6C4Q8NGE1 309 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 OR52E1Q8NGJ3 308 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 ZNF480Q8WV37 535 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 CMTM5Q96DZ9 223 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 PTCD3Q96EY7 689 aaKnown RBP12.18□□□□□ -0.46
VMP1-202ENST00000585847 PPP3R2Q96LZ3 170 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 PKP4Q99569 1192 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 CCDC3Q9BQI4 270 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
VMP1-202ENST00000585847 NUF2Q9BZD4 464 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 NDE1Q9NXR1 346 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 CIDEBQ9UHD4 219 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms