RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 ZC3HC1Q86WB0 502 aaKnown RBP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 SPNS2Q8IVW8 549 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 PALM2Q8IXS6 379 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 CSNK1A1LQ8N752 337 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 GPATCH11Q8N954 259 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 CLEC1AQ8NC01 280 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 ANKRD7Q92527 254 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 SMAD5Q99717 465 aaKnown RBP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 MCMBPQ9BTE3 642 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 SGPP1Q9BX95 441 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 TRIM4Q9C037 500 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 CLMPQ9H6B4 373 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 SYNPO2LQ9H987 977 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 TMEM184CQ9NVA4 438 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 P4HTMQ9NXG6 502 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 GPR83Q9NYM4 423 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 CTSFQ9UBX1 484 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 VWA7Q9Y334 891 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 ZNF451Q9Y4E5 1061 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 PSAT1Q9Y617 370 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 TNRC6AQ8NDV7 1962 aaKnown RBP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 HECTD1Q9ULT8 2610 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 AGPSO00116 658 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 HAT1O14929 419 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 PRPF4O43172 522 aaKnown RBP eCLIP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 RAD51CO43502 376 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 CASQ1P31415 396 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 FOXK1P85037 733 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 TSTA3Q13630 321 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 DSG2Q14126 1118 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 THEMIS2Q5TEJ8 643 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 VWA5B1Q5TIE3 1220 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 DUPD1Q68J44 220 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 AGTRAPQ6RW13 159 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 ANKMY2Q8IV38 441 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 ZBED8Q8IZ13 594 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 TEX19Q8NA77 164 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 FDCSPQ8NFU4 85 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 RERGQ96A58 199 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 THAP11Q96EK4 314 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 CABS1Q96KC9 395 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 OLFM1Q99784 485 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 NUDT9Q9BW91 350 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 FAM129AQ9BZQ8 928 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 POPDC3Q9HBV1 291 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 ZNF304Q9HCX3 659 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 SEMA3GQ9NS98 782 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 CUEDC1Q9NWM3 386 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 GRHL1Q9NZI5 618 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 C5AR2Q9P296 337 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 ZNF282Q9UDV7 671 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 CDC14AQ9UNH5 594 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 NOVA2Q9UNW9 492 aaKnown RBP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 RUVBL1Q9Y265 456 aaKnown RBP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 SNX24Q9Y343 169 aa12.54□□□□□ -0.4
ERBB2-220ENST00000584684 USP9XQ93008 2570 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-220ENST00000584684 RELNP78509 3460 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 A0A1W2PQ72 361 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 PCDH17O14917 1159 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 EIF2S1P05198 315 aaKnown RBP12.53□□□□□ -0.4
ERBB2-220ENST00000584684 HIST1H2AGP0C0S8 130 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-220ENST00000584684 HIST1H2ADP20671 130 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 FBLP22087 321 aaKnown RBP12.53□□□□□ -0.4
ERBB2-220ENST00000584684 OR1D4P47884 311 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 RPS15AP62244 130 aaKnown RBP12.53□□□□□ -0.4
ERBB2-220ENST00000584684 KCNC4Q03721 635 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 FAM53BQ14153 422 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 MYBPC3Q14896 1274 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 PPP1R3AQ16821 1122 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 LCTLQ6UWM7 567 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 MBOAT1Q6ZNC8 495 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 CYS1Q717R9 158 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 STRA8Q7Z7C7 330 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 C17orf64Q86WR6 236 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 OR56A3Q8NH54 315 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 ATL1Q8WXF7 558 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 FBXL8Q96CD0 374 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 HIST1H2AHQ96KK5 128 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 HIST1H2AJQ99878 128 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 HAUS8Q9BT25 410 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 H2AFJQ9BTM1 129 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 DRC3Q9H069 523 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 RHOJQ9H4E5 214 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 C14orf105Q9NVL8 296 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 HS3ST3B1Q9Y662 390 aa12.53□□□□□ -0.4
ERBB2-220ENST00000584684 FAM95CA0A1B0GW59 222 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 PABPN1LA6NDY0 278 aaKnown RBP12.52□□□□□ -0.41
ERBB2-220ENST00000584684 H7BY64 318 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 PYCARD-AS1I3L0S3 204 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 SOCS6O14544 535 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 P2RX6O15547 441 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 DPM1O60762 260 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 SORBS2O94875 1100 aaKnown RBP12.52□□□□□ -0.41
ERBB2-220ENST00000584684 ALPPP05187 535 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 GSTA2P09210 222 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 SLC26A3P40879 764 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 CD97P48960 835 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 FOXL2P58012 376 aa12.52□□□□□ -0.41
ERBB2-220ENST00000584684 CSNK1G2P78368 415 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms