RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 WDR54Q9H977 334 aa18.61■□□□□ 0.57
SREBF1-220ENST00000581707 ZNF304Q9HCX3 659 aa18.61■□□□□ 0.57
SREBF1-220ENST00000581707 TMEM184CQ9NVA4 438 aa18.61■□□□□ 0.57
SREBF1-220ENST00000581707 NSMCE4AQ9NXX6 385 aa18.61■□□□□ 0.57
SREBF1-220ENST00000581707 GRHL1Q9NZI5 618 aa18.61■□□□□ 0.57
SREBF1-220ENST00000581707 MAU2Q9Y6X3 613 aa18.61■□□□□ 0.57
SREBF1-220ENST00000581707 PCSK5Q92824 1860 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 PABPN1LA6NDY0 278 aaKnown RBP18.6■□□□□ 0.57
SREBF1-220ENST00000581707 A6NL46 340 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 HAT1O14929 419 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 PDGFAP04085 211 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 SAT1P21673 171 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 HRH2P25021 359 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 CASRP41180 1078 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 KLRB1Q12918 225 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 NAE1Q13564 534 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 NKG7Q16617 165 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 ZNF572Q7Z3I7 529 aaPredicted RBP18.6■□□□□ 0.57
SREBF1-220ENST00000581707 COL26A1Q96A83 441 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 C10orf90Q96M02 699 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 FER1L6-AS2Q96M78 137 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 RAB17Q9H0T7 212 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 SYNPO2LQ9H987 977 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 MLXIPLQ9NP71 852 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 ARL15Q9NXU5 204 aa18.6■□□□□ 0.57
SREBF1-220ENST00000581707 G3BP2Q9UN86 482 aaKnown RBP18.6■□□□□ 0.57
SREBF1-220ENST00000581707 RUVBL1Q9Y265 456 aaKnown RBP18.6■□□□□ 0.57
SREBF1-220ENST00000581707 MYO18BQ8IUG5 2567 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 FAM95CA0A1B0GW59 222 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 TXNDC9O14530 226 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 CEACAM4O75871 244 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 IGHEP01854 428 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 CCND1P24385 295 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 SSTR1P30872 391 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 PLTPP55058 493 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 AP1S2P56377 157 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 CAV1Q03135 178 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 TLE1Q04724 770 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 HKDC1Q2TB90 917 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 TMEM207Q6UWW9 146 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 PPP1R32Q7Z5V6 425 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 C17orf64Q86WR6 236 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 PLD3Q8IV08 490 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 NACC2Q96BF6 587 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 ALKBH8Q96BT7 664 aaKnown RBP18.59■□□□□ 0.57
SREBF1-220ENST00000581707 SPSB2Q99619 263 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 SMYD2Q9NRG4 433 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 P4HTMQ9NXG6 502 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 CTSFQ9UBX1 484 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 NXT1Q9UKK6 140 aaKnown RBP18.59■□□□□ 0.57
SREBF1-220ENST00000581707 CDC14AQ9UNH5 594 aa18.59■□□□□ 0.57
SREBF1-220ENST00000581707 PIAS1O75925 651 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 ZNF37AP17032 561 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-220ENST00000581707 TAS2R39P59534 338 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 CKAP4Q07065 602 aaKnown RBP18.58■□□□□ 0.56
SREBF1-220ENST00000581707 ILF2Q12905 390 aaKnown RBP18.58■□□□□ 0.56
SREBF1-220ENST00000581707 COLEC12Q5KU26 742 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 DCAF10Q5QP82 559 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 GARNL3Q5VVW2 1013 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 CAPN13Q6MZZ7 669 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-220ENST00000581707 SHISA6Q6ZSJ9 500 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 NKAPQ8N5F7 415 aaKnown RBP18.58■□□□□ 0.56
SREBF1-220ENST00000581707 CLEC1AQ8NC01 280 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 FDCSPQ8NFU4 85 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 C16orf45Q96MC5 204 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-220ENST00000581707 SGPP1Q9BX95 441 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 EPN3Q9H201 632 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 RHOJQ9H4E5 214 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 SOX17Q9H6I2 414 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-220ENST00000581707 CDC23Q9UJX2 597 aa18.58■□□□□ 0.56
SREBF1-220ENST00000581707 VSTM2BA6NLU5 285 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 WISP1O95388 367 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 GUCA1CO95843 209 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 ENO2P09104 434 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-220ENST00000581707 NPPBP16860 134 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 FBLP22087 321 aaKnown RBP18.57■□□□□ 0.56
SREBF1-220ENST00000581707 MMP11P24347 488 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 RPS15AP62244 130 aaKnown RBP18.57■□□□□ 0.56
SREBF1-220ENST00000581707 CSNK1G2P78368 415 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 OCA2Q04671 838 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 TRADDQ15628 312 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 LCTLQ6UWM7 567 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 C3orf62Q6ZUJ4 267 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 CYS1Q717R9 158 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 FBXO25Q8TCJ0 367 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 ATL1Q8WXF7 558 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 CDKL2Q92772 493 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 FBXL8Q96CD0 374 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 MVB12AQ96EY5 273 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 VPS39Q96JC1 886 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 HAUS8Q9BT25 410 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 MCMBPQ9BTE3 642 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 NUDT9Q9BW91 350 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 GPR83Q9NYM4 423 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 ZNF282Q9UDV7 671 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-220ENST00000581707 IKZF3Q9UKT9 509 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 SH2B3Q9UQQ2 575 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 ZNF451Q9Y4E5 1061 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 PCDHGB7Q9Y5F8 929 aa18.57■□□□□ 0.56
SREBF1-220ENST00000581707 NBASA2RRP1 2371 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms