RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 TP53TG5Q9Y2B4 290 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 PCDHGB7Q9Y5F8 929 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 CEACAM4O75871 244 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 DNAJB5O75953 348 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 EIF2S1P05198 315 aaKnown RBP14.16□□□□□ -0.14
SS18-212ENST00000579061 OTX2P32243 289 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 RPS15AP62244 130 aaKnown RBP14.16□□□□□ -0.14
SS18-212ENST00000579061 NAE1Q13564 534 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 ATP1A4Q13733 1029 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 SLC9A5Q14940 896 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 NKG7Q16617 165 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 CPZQ66K79 652 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 TMEM207Q6UWW9 146 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 C3orf62Q6ZUJ4 267 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 PRICKLE2Q7Z3G6 844 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 MRGPREQ86SM8 312 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 CSNK1A1LQ8N752 337 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 OR56A3Q8NH54 315 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 FBXO25Q8TCJ0 367 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 RERGQ96A58 199 aaPredicted RBP14.16□□□□□ -0.14
SS18-212ENST00000579061 FBXL8Q96CD0 374 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 THAP11Q96EK4 314 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 C10orf90Q96M02 699 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 FER1L6-AS2Q96M78 137 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 CPNE1Q99829 537 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 HAUS8Q9BT25 410 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 ZNF304Q9HCX3 659 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 MLXIPLQ9NP71 852 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 SMYD2Q9NRG4 433 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 ABCF3Q9NUQ8 709 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 CUEDC1Q9NWM3 386 aaPredicted RBP14.16□□□□□ -0.14
SS18-212ENST00000579061 ARL15Q9NXU5 204 aa14.16□□□□□ -0.14
SS18-212ENST00000579061 TNRC6AQ8NDV7 1962 aaKnown RBP14.15□□□□□ -0.14
SS18-212ENST00000579061 PCSK5Q92824 1860 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 KCNE1BA0A087WTH5 132 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 TCRBV9S1A1TA0A576 114 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 FAM159BA6NKW6 160 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 VSTM2BA6NLU5 285 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 H7BY64 318 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 PEX12O00623 359 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 HAT1O14929 419 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 PRPF4O43172 522 aaKnown RBP eCLIP14.15□□□□□ -0.14
SS18-212ENST00000579061 URI1O94763 535 aaPredicted RBP14.15□□□□□ -0.14
SS18-212ENST00000579061 MED26O95402 600 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 UMODP07911 640 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 MMP11P24347 488 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 OR1D4P47884 311 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 CCL11P51671 97 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 TAS2R39P59534 338 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 POU4F1Q01851 419 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 KLRB1Q12918 225 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 FAM53BQ14153 422 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 CAPN13Q6MZZ7 669 aaPredicted RBP14.15□□□□□ -0.14
SS18-212ENST00000579061 C8orf74Q6P047 294 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 SBSNQ6UWP8 590 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 ZDHHC24Q6UX98 284 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 MBOAT1Q6ZNC8 495 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 CAPN12Q6ZSI9 719 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 ADCK2Q7Z695 626 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 C17orf64Q86WR6 236 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 PTRH1Q86Y79 214 aaKnown RBP14.15□□□□□ -0.14
SS18-212ENST00000579061 CABS1Q96KC9 395 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 PRAP1Q96NZ9 151 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 SPSB2Q99619 263 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 SLC25A23Q9BV35 468 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 FAM129AQ9BZQ8 928 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 ATG10Q9H0Y0 220 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 TXNDC16Q9P2K2 825 aa14.15□□□□□ -0.14
SS18-212ENST00000579061 G3BP2Q9UN86 482 aaKnown RBP14.15□□□□□ -0.14
SS18-212ENST00000579061 RUVBL1Q9Y265 456 aaKnown RBP14.15□□□□□ -0.14
SS18-212ENST00000579061 IGLV3-12A0A075B6K2 115 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 KIF2AO00139 706 aaPredicted RBP14.14□□□□□ -0.15
SS18-212ENST00000579061 KLHL41O60662 606 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 C1QAP02745 245 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 NPPBP16860 134 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 SAT1P21673 171 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 GP5P40197 560 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 MAGEA4P43358 317 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 PGGT1BP53609 377 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 SLC12A2P55011 1212 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 GPX6P59796 221 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 CSNK1G2P78368 415 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 CDKL1Q00532 357 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 CHAF1BQ13112 559 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 NDUFA9Q16795 377 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 PPP1R3AQ16821 1122 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 ASB18Q6ZVZ8 466 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 PPP1R32Q7Z5V6 425 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 HPS6Q86YV9 775 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 ARHGEF39Q8N4T4 335 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.14□□□□□ -0.15
SS18-212ENST00000579061 COL26A1Q96A83 441 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 TSPAN17Q96FV3 270 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 RBBP8Q99708 897 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 SARGQ9BW04 601 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 SYNPO2LQ9H987 977 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 GPAMQ9HCL2 828 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 SEMA3GQ9NS98 782 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 P4HTMQ9NXG6 502 aa14.14□□□□□ -0.15
SS18-212ENST00000579061 DOCK10Q96BY6 2186 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms