RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 ATE1O95260 518 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 RPN2P04844 631 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 KIR2DL3P43628 341 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 NR2C2P49116 596 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 EMP3P54852 163 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 SNTB1Q13884 538 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 DBN1Q16643 649 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 CHSY3Q70JA7 882 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 RNF44Q7L0R7 432 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 BZW1Q7L1Q6 419 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 DCUN1D3Q8IWE4 304 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 SLC5A8Q8N695 610 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 POGLUT1Q8NBL1 392 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 OR5M3Q8NGP4 307 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 OR10Q1Q8NGQ4 319 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 CFAP61Q8NHU2 1237 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 MIPEPQ99797 713 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 SLC6A16Q9GZN6 736 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 IMPACTQ9P2X3 320 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 C19orf25Q9UFG5 118 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 KLK4Q9Y5K2 254 aa13.3□□□□□ -0.28
PPP4R1-206ENST00000577779 A6NNC1 897 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 H0YGG7 62 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 TFEBP19484 476 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 PSMB5P28074 263 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 RFC3P40938 356 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 GEMP55040 296 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 ARF3P61204 181 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 MYL5Q02045 173 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 GRB7Q14451 532 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 EXT1Q16394 746 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 MFSD4BQ5TF39 518 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 RANBP10Q6VN20 620 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 PIANPQ8IYJ0 282 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 M1APQ8TC57 530 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 DNAJC1Q96KC8 554 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 CYTH2Q99418 400 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 VAT1Q99536 393 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 ZFYVE21Q9BQ24 234 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 C19orf43Q9BQ61 176 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 VN1R1Q9GZP7 353 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 NEUROD4Q9HD90 331 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 CRIM1Q9NZV1 1036 aa13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 RUVBL1Q9Y265 456 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-206ENST00000577779 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 HS6ST1O60243 411 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 ANXA9O76027 345 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 KRT1P04264 644 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 TAS2R50P59544 299 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 PPP2R2BQ00005 443 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 MAT1AQ00266 395 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 HKDC1Q2TB90 917 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 MINDY4Q4G0A6 757 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 ODF2Q5BJF6 829 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 CMPK2Q5EBM0 449 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 FIGNQ5HY92 759 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 EMC4Q5J8M3 183 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 ZNF468Q5VIY5 522 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 ARHGAP11AQ6P4F7 1023 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 SLC22A15Q8IZD6 547 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 CSNK1A1LQ8N752 337 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 OR2L3Q8NG85 312 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 TMEM125Q96AQ2 219 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 RAB11FIP5Q9BXF6 653 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 DRC3Q9H069 523 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 MMP25Q9NPA2 562 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 DMRT3Q9NQL9 472 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 LCMT1Q9UIC8 334 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 TRHDEQ9UKU6 1024 aa13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 SONP18583 2426 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-206ENST00000577779 A0A087X0T9 212 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 VPS26AO75436 327 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 PDE9AO76083 593 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 OR56A5P0C7T3 313 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 FAM228BP0C875 321 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 PECAM1P16284 738 aaPredicted RBP13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 ADRA1AP35348 466 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 ZFP36L2P47974 494 aaKnown RBP13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 FBXW10Q5XX13 1052 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 FBXO42Q6P3S6 717 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 ALKBH5Q6P6C2 394 aaKnown RBP13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 LRRC8BQ6P9F7 803 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 ANKRD37Q7Z713 158 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 KRTAP1-3Q8IUG1 177 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 GORASP1Q9BQQ3 440 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 GBA3Q9H227 469 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 CDCP1Q9H5V8 836 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 UVRAGQ9P2Y5 699 aa13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 BZW2Q9Y6E2 419 aaKnown RBP13.27□□□□□ -0.29
PPP4R1-206ENST00000577779 OR2A25A4D2G3 310 aa13.26□□□□□ -0.29
PPP4R1-206ENST00000577779 SOWAHDA6NJG2 315 aa13.26□□□□□ -0.29
PPP4R1-206ENST00000577779 NDC80O14777 642 aa13.26□□□□□ -0.29
PPP4R1-206ENST00000577779 FOXS1O43638 330 aa13.26□□□□□ -0.29
PPP4R1-206ENST00000577779 CYC1P08574 325 aa13.26□□□□□ -0.29
PPP4R1-206ENST00000577779 CYB561P49447 251 aa13.26□□□□□ -0.29
PPP4R1-206ENST00000577779 NKX6-1P78426 367 aaPredicted RBP13.26□□□□□ -0.29
PPP4R1-206ENST00000577779 TYRO3Q06418 890 aa13.26□□□□□ -0.29
PPP4R1-206ENST00000577779 HSPA14Q0VDF9 509 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms