RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 R4GN57 208 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZFHX2Q9C0A1 2572 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 MIA3Q5JRA6 1907 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 RAD50Q92878 1312 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 DENND4AQ7Z401 1863 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 A0A1W2PR77 199 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 ARHGEF37A1IGU5 675 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 OR6C76A6NM76 312 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 USP17L23D6RBM5 183 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 HAS3O00219 553 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 HS6ST1O60243 411 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 KERAO60938 352 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 KRT36O76013 467 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CHRNA1P02708 482 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 TPOP07202 933 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SMIM10L2AP0DMW4 78 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SMIM10L2BP0DMW5 78 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 GHRP10912 638 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 KRT10P13645 584 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 P4HA1P13674 534 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 HLA-DOBP13765 273 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 IL7RP16871 459 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 HLA-DPA1P20036 260 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 PON1P27169 355 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 HOXA13P31271 388 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CDAP32320 146 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CA8P35219 290 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 GABRB2P47870 512 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CCR3P51677 355 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CLCN3P51790 818 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 FUT6P51993 359 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZNF132P52740 706 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 HNRNPH2P55795 449 aaKnown RBP3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 ARL16Q0P5N6 197 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZRSR1Q15695 479 aaKnown RBP3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CTF1Q16619 201 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 HYAL4Q2M3T9 481 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 TYSND1Q2T9J0 566 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 C15orf59Q2T9L4 293 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 KRTAP24-1Q3LI83 254 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZSCAN23Q3MJ62 389 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 IGSF11Q5DX21 431 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CXorf66Q5JRM2 361 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SPOUT1Q5T280 376 aaKnown RBP3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 ARHGEF16Q5VV41 709 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CST9LP1Q5W188 147 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 PMS2CLQ68D20 193 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 GALNT17Q6IS24 598 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 UNQ6126/PRO20091Q6UXV3 157 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 USP43Q70EL4 1123 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 DGLUCYQ7Z3D6 616 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SMIM29Q86T20 159 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 TUSC5Q8IXB3 177 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 NAGSQ8N159 534 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 KBTBD3Q8NAB2 608 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 POC1AQ8NBT0 407 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SETD6Q8TBK2 473 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 UTP15Q8TED0 518 aaKnown RBP3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SLC20A1Q8WUM9 679 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 KCNE4Q8WWG9 221 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SEPT8Q92599 483 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 CCDC114Q96M63 670 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 AK8Q96MA6 479 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SPATA33Q96N06 139 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 OR2A14Q96R47 310 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 TMEM47Q9BQJ4 181 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 KIFC3Q9BVG8 833 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 C1QTNF5Q9BXJ0 243 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 HRH4Q9H3N8 390 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 MFSD1Q9H3U5 465 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 TLE6Q9H808 572 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 EVA1AQ9H8M9 152 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 UBTD1Q9HAC8 227 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 ARHGEF38Q9NXL2 777 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 AKAP7Q9P0M2 348 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 EPS15L1Q9UBC2 864 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 MOSPD1Q9UJG1 213 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 OSGIN1Q9UJX0 560 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 KLHL20Q9Y2M5 609 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 DCHS1Q96JQ0 3298 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 MYH15Q9Y2K3 1946 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 SPTBN4Q9H254 2564 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 RALGAPA1Q6GYQ0 2036 aa3.22□□□□□ -1.89
HMGB1P6-201ENST00000569046 ADGRA3Q8IWK6 1321 aa3.21□□□□□ -1.89
HMGB1P6-201ENST00000569046 LAMA4Q16363 1823 aa3.21□□□□□ -1.89
HMGB1P6-201ENST00000569046 PATJQ8NI35 1801 aa3.21□□□□□ -1.89
HMGB1P6-201ENST00000569046 FANCMQ8IYD8 2048 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 WDR87Q6ZQQ6 2873 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 TCRBV21S2A2A0A5A6 115 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 A6NL46 340 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 HIDE1A8MVS5 230 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 C2CD4DB7Z1M9 353 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CPLX1O14810 134 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 RNF113AO15541 343 aaKnown RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 XPNPEP2O43895 674 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 MITFO75030 526 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 HMMRO75330 724 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 AVILO75366 819 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 NDUFS3O75489 264 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 NKX2-2O95096 273 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms