RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 FFAR3O14843 346 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 GPR42O15529 346 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 P2RX6O15547 441 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 TSPAN12O95859 305 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 FBLP22087 321 aaKnown RBP24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 FDXRP22570 491 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 MMP11P24347 488 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 SP140Q13342 867 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 CAPN12Q6ZSI9 719 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 PALM2Q8IXS6 379 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 RERGQ96A58 199 aaPredicted RBP24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 CCDC138Q96M89 665 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 PRAP1Q96NZ9 151 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 MESP1Q9BRJ9 268 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 ATG10Q9H0Y0 220 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 PARVBQ9HBI1 364 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 UTP6Q9NYH9 597 aaKnown RBP24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 ZFATQ9P243 1243 aa24.1■■□□□ 1.45
AC009041.3-201ENST00000564390 HEATR5BQ9P2D3 2071 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 AGPSO00116 658 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 IL2P60568 153 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 FAM45BPQ6NSW5 357 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 PRMT9Q6P2P2 845 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 AGTRAPQ6RW13 159 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 GALNT16Q8N428 558 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 FAM45AQ8TCE6 357 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 NXT1Q9UKK6 140 aaKnown RBP24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 HS3ST3B1Q9Y662 390 aa24.09■■□□□ 1.45
AC009041.3-201ENST00000564390 MDC1Q14676 2089 aaKnown RBP24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 SOCS6O14544 535 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 SAT1P21673 171 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 SNRPNP63162 240 aaKnown RBP24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 MGAT5Q09328 741 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 VWA5B1Q5TIE3 1220 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 ZBED8Q8IZ13 594 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 SPATA4Q8NEY3 305 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 STT3BQ8TCJ2 826 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 SMAD5Q99717 465 aaKnown RBP24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 CRB3Q9BUF7 120 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 CORO1CQ9ULV4 474 aaPredicted RBP24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 VWA7Q9Y334 891 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 PCDHGB7Q9Y5F8 929 aa24.08■■□□□ 1.45
AC009041.3-201ENST00000564390 VSTM2BA6NLU5 285 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 TTLL8A6PVC2 850 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 E7ESA3 106 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 SLC16A5O15375 505 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 RAD51CO43502 376 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 PIAS1O75925 651 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 IGHEP01854 428 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 KLC1Q07866 573 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 NAE1Q13564 534 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 FRG1Q14331 258 aaKnown RBP24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 RBBP7Q16576 425 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 STRA8Q7Z7C7 330 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 MIB2Q96AX9 1013 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 MIEF2Q96C03 454 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 ZNF282Q9UDV7 671 aaPredicted RBP24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 IKZF3Q9UKT9 509 aa24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 MRPS2Q9Y399 296 aaKnown RBP24.07■■□□□ 1.44
AC009041.3-201ENST00000564390 ANKRD12Q6UB98 2062 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 DPM1O60762 260 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 ZGLP1P0C6A0 271 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 CASQ1P31415 396 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 EMP3P54852 163 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 OCA2Q04671 838 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 ZNF460Q14592 562 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 MYBPC3Q14896 1274 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 VWA2Q5GFL6 755 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 KIRREL2Q6UWL6 708 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 SYT10Q6XYQ8 523 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 ARHGEF39Q8N4T4 335 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 RBMXL3Q8N7X1 1067 aaKnown RBP24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 YIPF2Q9BWQ6 316 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 ARL15Q9NXU5 204 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 TRPC4Q9UBN4 977 aa24.06■■□□□ 1.44
AC009041.3-201ENST00000564390 ASH1LQ9NR48 2969 aaKnown RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 A0A0A6YYC8 382 aaPredicted RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 FAM187AA6NFU0 413 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 I3L1I5 382 aaPredicted RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 SORBS2O94875 1100 aaKnown RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 HIST1H2AGP0C0S8 130 aaPredicted RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 HIST1H2ADP20671 130 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 ITGA3P26006 1051 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 CD97P48960 835 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 DSG2Q14126 1118 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 ZXDCQ2QGD7 858 aaPredicted RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 PRR30Q53SZ7 412 aaPredicted RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 SLC6A19Q695T7 634 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 JMJD6Q6NYC1 403 aaPredicted RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 TMEM207Q6UWW9 146 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 VN1R4Q7Z5H5 301 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 ZC3HC1Q86WB0 502 aaKnown RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 C17orf64Q86WR6 236 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 AMER3Q8N944 861 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 PYCR2Q96C36 320 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 MMABQ96EY8 250 aaPredicted RBP24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 HIST1H2AHQ96KK5 128 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 HIST1H2AJQ99878 128 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 MACROD1Q9BQ69 325 aa24.05■■□□□ 1.44
AC009041.3-201ENST00000564390 ERP44Q9BS26 406 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms