RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 HPCAL1P37235 193 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 PEX19P40855 299 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 GSTM5P46439 218 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 CDK9P50750 372 aaKnown RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 PHC1P78364 1004 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 TOP3AQ13472 1001 aaPredicted RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 CAMK1Q14012 370 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 DOC2AQ14183 400 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 ELOAQ14241 798 aaKnown RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 CBX2Q14781 532 aaPredicted RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 PON2Q15165 354 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 HIST2H2ACQ16777 129 aaPredicted RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 CYBRD1Q53TN4 286 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 RBM48Q5RL73 367 aaKnown RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 CCNYL2Q5T2Q4 361 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 HIST2H2AA3Q6FI13 130 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 MED27Q6P2C8 311 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 RBM44Q6ZP01 1051 aaKnown RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 GPR155Q7Z3F1 870 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 R3HCC1LQ7Z5L2 792 aaKnown RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 UBE2Q1Q7Z7E8 422 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 METTL25Q8N6Q8 603 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 OR9A1PQ8NGU1 263 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 ZNF420Q8TAQ5 688 aaPredicted RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 SMG7Q92540 1137 aaKnown RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 FIG4Q92562 907 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 SMARCD2Q92925 531 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 BADQ92934 168 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 TMBIM1Q969X1 311 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 COQ8BQ96D53 544 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 MTERF3Q96E29 417 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 APIPQ96GX9 242 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 PYURFQ96I23 114 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 VPS50Q96JG6 964 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 APOLD1Q96LR9 279 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 ZSWIM3Q96MP5 696 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 TSSK3Q96PN8 268 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 SEPHS2Q99611 448 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 TUBA1CQ9BQE3 449 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 SGPP1Q9BX95 441 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 GRIP2Q9C0E4 1043 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 PITHD1Q9GZP4 211 aaPredicted RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 GABARAPL1Q9H0R8 117 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 RAD21L1Q9H4I0 556 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 SFXN1Q9H9B4 322 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 NTN4Q9HB63 628 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 PIDD1Q9HB75 910 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 DYRK4Q9NR20 520 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 GDE1Q9NZC3 331 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 LIMD1Q9UGP4 676 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 ATP6V1HQ9UI12 483 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 AK5Q9Y6K8 562 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 PCM1Q15154 2024 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 C2orf16Q68DN1 1984 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 TCF20Q9UGU0 1960 aaKnown RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 MGAT4DA6NG13 374 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 OR2AG2A6NM03 316 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 G3V2T6 193 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 KPNA3O00505 521 aaPredicted RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 SCAMP2O15127 329 aaKnown RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 VILLO15195 856 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 PI15O43692 258 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 PRAMEF4O60810 478 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 SCN2BO60939 215 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 DNAJB5O75953 348 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 C1orf105O95561 183 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 SOD1P00441 154 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 CST1P01037 141 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 RPN2P04844 631 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ADRB3P13945 408 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ATP6V1B1P15313 513 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ITPKAP23677 461 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 TIA1P31483 386 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTF1-206ENST00000560447 PIK3CBP42338 1070 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 MTHFRP42898 656 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 HLCSP50747 726 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 CTSCP53634 463 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 RAD23AP54725 363 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 GABARAPL2P60520 117 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 NTHL1P78549 312 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 HTRA3P83110 453 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 PPP2R2BQ00005 443 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 NAE1Q13564 534 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 GK3PQ14409 553 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ARHGAP19Q14CB8 494 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 AGERQ15109 404 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 UGT8Q16880 541 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ZBED5Q49AG3 693 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTF1-206ENST00000560447 FNDC3BQ53EP0 1204 aaKnown RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 LRRC73Q5JTD7 316 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 C9orf64Q5T6V5 341 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 PRAMEF9Q5VWM5 478 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 FAM46CQ5VWP2 391 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ADAMTSL4Q6UY14 1074 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 GCNT7Q6ZNI0 430 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 SLCO4C1Q6ZQN7 724 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ERN2Q76MJ5 926 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms