RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 DTWD1Q8N5C7 304 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 CSNK1A1LQ8N752 337 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 CLEC1AQ8NC01 280 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 COL26A1Q96A83 441 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 ALKBH8Q96BT7 664 aaKnown RBP12.02□□□□□ -0.49
LRRC28-214ENST00000559433 VPS50Q96JG6 964 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 CABS1Q96KC9 395 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 HIST1H2AHQ96KK5 128 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 C16orf45Q96MC5 204 aaPredicted RBP12.02□□□□□ -0.49
LRRC28-214ENST00000559433 HIST1H2AJQ99878 128 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 H2AFJQ9BTM1 129 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 PCBD2Q9H0N5 130 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 RAB17Q9H0T7 212 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 ATG10Q9H0Y0 220 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 WDR54Q9H977 334 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 CUEDC1Q9NWM3 386 aaPredicted RBP12.02□□□□□ -0.49
LRRC28-214ENST00000559433 ARL15Q9NXU5 204 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 NSMCE4AQ9NXX6 385 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 GRHL1Q9NZI5 618 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 CTSFQ9UBX1 484 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 ZNF451Q9Y4E5 1061 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 MAU2Q9Y6X3 613 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 TENM4Q6N022 2769 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 FAM95CA0A1B0GW59 222 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 H7BY64 318 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 EIF3HO15372 352 aaKnown RBP eCLIP12.01□□□□□ -0.49
LRRC28-214ENST00000559433 ONECUT2O95948 504 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 ALBP02768 609 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 PDGFAP04085 211 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 UMODP07911 640 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 CCND1P24385 295 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 CBLBQ13191 982 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 MUM1Q2TAK8 710 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 HKDC1Q2TB90 917 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 PRTGQ2VWP7 1150 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 COLEC12Q5KU26 742 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 PRMT9Q6P2P2 845 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 AGTRAPQ6RW13 159 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 ZNF572Q7Z3I7 529 aaPredicted RBP12.01□□□□□ -0.49
LRRC28-214ENST00000559433 PPP1R32Q7Z5V6 425 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 PLD3Q8IV08 490 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 C10orf90Q96M02 699 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 PRAP1Q96NZ9 151 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 OR2A5Q96R48 311 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 YIPF2Q9BWQ6 316 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 TRIM54Q9BYV2 358 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 SYNPO2LQ9H987 977 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 ZNF304Q9HCX3 659 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 NXT1Q9UKK6 140 aaKnown RBP12.01□□□□□ -0.49
LRRC28-214ENST00000559433 RUVBL1Q9Y265 456 aaKnown RBP12.01□□□□□ -0.49
LRRC28-214ENST00000559433 PCDHGB7Q9Y5F8 929 aa12.01□□□□□ -0.49
LRRC28-214ENST00000559433 PCDHGA9Q9Y5G4 932 aaKnown RBP12.01□□□□□ -0.49
LRRC28-214ENST00000559433 FLNBO75369 2602 aaKnown RBP12.01□□□□□ -0.49
LRRC28-214ENST00000559433 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 TTLL8A6PVC2 850 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 TXNDC9O14530 226 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 PIAS1O75925 651 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 ENO2P09104 434 aaPredicted RBP12□□□□□ -0.49
LRRC28-214ENST00000559433 ZNF37AP17032 561 aaPredicted RBP12□□□□□ -0.49
LRRC28-214ENST00000559433 FBLP22087 321 aaKnown RBP12□□□□□ -0.49
LRRC28-214ENST00000559433 HRH2P25021 359 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 SSTR1P30872 391 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 EMP3P54852 163 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 PLTPP55058 493 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 AP1S2P56377 157 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 CAV1Q03135 178 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 RELAQ04206 551 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 OCA2Q04671 838 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 NAE1Q13564 534 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 ZNF460Q14592 562 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 NKG7Q16617 165 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 CAPN13Q6MZZ7 669 aaPredicted RBP12□□□□□ -0.49
LRRC28-214ENST00000559433 TMEM207Q6UWW9 146 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 SHISA6Q6ZSJ9 500 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 CCDC25Q86WR0 208 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 TMEM151BQ8IW70 566 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 CDKL2Q92772 493 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 SPSB2Q99619 263 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 EPN3Q9H201 632 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 SLC26A1Q9H2B4 701 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 RHOJQ9H4E5 214 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 SOX17Q9H6I2 414 aaPredicted RBP12□□□□□ -0.49
LRRC28-214ENST00000559433 SMYD2Q9NRG4 433 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 TMEM184CQ9NVA4 438 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 P4HTMQ9NXG6 502 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 GPR83Q9NYM4 423 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 CDC23Q9UJX2 597 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 CDC14AQ9UNH5 594 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 SH2B3Q9UQQ2 575 aa12□□□□□ -0.49
LRRC28-214ENST00000559433 NPEPPSL1A6NEC2 478 aa11.99□□□□□ -0.49
LRRC28-214ENST00000559433 P2RX6O15547 441 aa11.99□□□□□ -0.49
LRRC28-214ENST00000559433 PRPF4O43172 522 aaKnown RBP eCLIP11.99□□□□□ -0.49
LRRC28-214ENST00000559433 DPM1O60762 260 aa11.99□□□□□ -0.49
LRRC28-214ENST00000559433 CEACAM4O75871 244 aa11.99□□□□□ -0.49
LRRC28-214ENST00000559433 URI1O94763 535 aaPredicted RBP11.99□□□□□ -0.49
LRRC28-214ENST00000559433 GUCA1CO95843 209 aa11.99□□□□□ -0.49
LRRC28-214ENST00000559433 STATHP02808 62 aa11.99□□□□□ -0.49
LRRC28-214ENST00000559433 ALPPP05187 535 aa11.99□□□□□ -0.49
LRRC28-214ENST00000559433 CDH1P12830 882 aa11.99□□□□□ -0.49
LRRC28-214ENST00000559433 SLC12A2P55011 1212 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms