RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LBX1P52954 281 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 ACTN3Q08043 901 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 PHKG1Q16816 387 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 CDO1Q16878 200 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 MRGPRG-AS1Q2M3A8 158 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 FAM174BQ3ZCQ3 159 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 CTR9Q6PD62 1173 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 IL17RELQ6ZVW7 336 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 KCTD9Q7L273 389 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 AMIGO1Q86WK6 493 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 NUDT13Q86X67 352 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 CCDC83Q8IWF9 413 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 KLHDC8BQ8IXV7 354 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 RYBPQ8N488 228 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 C10orf53Q8N6V4 93 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 ARL10Q8N8L6 244 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 CCDC63Q8NA47 563 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 SPC24Q8NBT2 197 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 PHLDA1Q8WV24 401 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 P2RX5Q93086 422 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 ZNF501Q96CX3 271 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 SENP5Q96HI0 755 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 CABS1Q96KC9 395 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 MRPL9Q9BYD2 267 aaKnown RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 OR2B2Q9GZK3 357 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 SLC5A7Q9GZV3 580 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 ZMYND12Q9H0C1 365 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 IARS2Q9NSE4 1012 aaKnown RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 FAM207AQ9NSI2 230 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 ECHDC1Q9NTX5 307 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 P4HTMQ9NXG6 502 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 PKD2L2Q9NZM6 624 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 ZNF624Q9P2J8 865 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 GAB2Q9UQC2 676 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 RUVBL2Q9Y230 463 aaKnown RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 CHKBQ9Y259 395 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 PCDHGA1Q9Y5H4 931 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 R4GN57 208 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 C2orf81A6NN90 581 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 H0YIG0 161 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 H3BMM5 538 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 TTI1O43156 1089 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 BAG3O95817 575 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 SLC16A8O95907 504 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 GH1P01241 217 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 PRSS1P07477 247 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 IGHV4-38-2P0DP08 117 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 UROSP10746 265 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 F3P13726 295 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 EPORP19235 508 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 EFNA1P20827 205 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 CSTF2P33240 577 aaKnown RBP eCLIP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ATP6V1E1P36543 226 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 MAGEB1P43366 347 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 CDX1P47902 265 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 CRIP2P52943 208 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ASIC1P78348 528 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 UBXN1Q04323 297 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 LASP1Q14847 261 aaKnown RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 CCDC6Q16204 474 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 GPR33Q49SQ1 333 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ZC2HC1CQ53FD0 456 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ODF2Q5BJF6 829 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 SLC35E4Q6ICL7 350 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 OR4A47Q6IF82 309 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ADAM5Q6NVV9 412 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 NOTUMQ6P988 496 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 RAPH1Q70E73 1250 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ANKRD33Q7Z3H0 272 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 TRPT1Q86TN4 253 aaKnown RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ISCA2Q86U28 154 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 CLYBLQ8N0X4 340 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 LRTM2Q8N967 370 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 NOA1Q8NC60 698 aaKnown RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 NCOA7Q8NI08 942 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ST7LQ8TDW4 575 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 SEPT1Q8WYJ6 367 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 TM9SF4Q92544 642 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 TSACCQ96A04 125 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 PGM2Q96G03 612 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 GDAP1L1Q96MZ0 367 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 DUX3Q96PT4 197 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ZNF559Q9BR84 538 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ACAT2Q9BWD1 397 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 CDK19Q9BWU1 502 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 SRD5A3Q9H8P0 318 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 IL1RAPL2Q9NP60 686 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 DNAJC17Q9NVM6 304 aaKnown RBP2.81□□□□□ -1.96
SCFD1-213ENST00000554776 SPHK1Q9NYA1 384 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 VPS18Q9P253 973 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 FBXL5Q9UKA1 691 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 TRIM17Q9Y577 477 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 ABCC9O60706 1549 aa2.81□□□□□ -1.96
SCFD1-213ENST00000554776 KIF26BQ2KJY2 2108 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 PMS2P5A8MQ11 134 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 SNURFLB1AK76 121 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 C17orf105B2RV13 164 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 KBTBD13C9JR72 458 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 E5RGE8 158 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 F8VVB4 439 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms