RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ACTL8Q9H568 366 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 AKIRIN1Q9H9L7 192 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 STARD5Q9NSY2 213 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 CUTCQ9NTM9 273 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 WWOXQ9NZC7 414 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 RNF112Q9ULX5 631 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 PADI2Q9Y2J8 665 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 PCDHGA6Q9Y5G7 932 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 LOC105369274A0A096LPK9 316 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 LOC102723532A0A0G2JNH3 316 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 A0A1B0GX78 115 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 H0YGG7 62 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 TXNDC9O14530 226 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 TERTO14746 1132 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 HAT1O14929 419 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 NKX2-8O15522 239 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 RAB40ALP0C0E4 278 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 CDH1P12830 882 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 PTPN4P29074 926 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 SLC26A3P40879 764 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 ARF3P61204 181 aaPredicted RBP17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 RPS15AP62244 130 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 CYP4F2P78329 520 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 RELAQ04206 551 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 TGFBIQ15582 683 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 FBXO42Q6P3S6 717 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 FAM198BQ6UWH4 519 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 ZNF517Q6ZMY9 492 aaPredicted RBP17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 OR4N4Q8N0Y3 316 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 TBC1D19Q8N5T2 526 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 ENDOVQ8N8Q3 282 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 KIAA1191Q96A73 305 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 CABS1Q96KC9 395 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 UBXN10Q96LJ8 280 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 CATSPER2Q96P56 530 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 GBP5Q96PP8 586 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 CNOT10Q9H9A5 744 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 CD274Q9NZQ7 290 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 IFT80Q9P2H3 777 aaPredicted RBP17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 FARSAQ9Y285 508 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 ZFYVE26Q68DK2 2539 aa17.67■□□□□ 0.42
PRPF40B-216ENST00000552301 A0A096LPK6 155 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 HYKKA2RU49 373 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 ERVH48-1M5A8F1 160 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 DSCR3O14972 297 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 RIPK2O43353 540 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 CREG1O75629 220 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 C2P06681 752 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 FAM153BP0C7A2 387 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 PIM1P11309 404 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 NPPBP16860 134 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 TFEBP19484 476 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 CNTFP26441 200 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 CCR8P51685 355 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 COL9A2Q14055 689 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 NCF4Q15080 339 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 FAM83EQ2M2I3 478 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 MUM1Q2TAK8 710 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 FAM153CQ494X1 144 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 NKAIN1Q4KMZ8 207 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 LGSNQ5TDP6 509 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 ZNF385CQ66K41 422 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 KLC3Q6P597 504 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 SYVN1Q86TM6 617 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 THOC6Q86W42 341 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 PLD3Q8IV08 490 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 STAG3L4Q8TBR4 150 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 SLC5A11Q8WWX8 675 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 PTERQ96BW5 349 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 RHBDF1Q96CC6 855 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 RUFY1Q96T51 708 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 ARHGAP9Q9BRR9 750 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 VPS11Q9H270 941 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 ALG9Q9H6U8 611 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 ZNF180Q9UJW8 692 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 SH2B3Q9UQQ2 575 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 KCNE2Q9Y6J6 123 aa17.66■□□□□ 0.42
PRPF40B-216ENST00000552301 MDC1Q14676 2089 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 CDC14CA4D256 554 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 FITM1A5D6W6 292 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 SUPT3HB4E1H0 165 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 SUPT3HO75486 399 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 IPO13O94829 963 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 WDR47O94967 919 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 SLU7O95391 586 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 ITGB2P05107 769 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 CD63P08962 238 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 TNFRSF8P28908 595 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 RPS18P62269 152 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 CSNK1G2P78368 415 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 ERV3-1Q14264 604 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 SLC9A5Q14940 896 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 OR4D1Q15615 310 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 CRTC2Q53ET0 693 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 CDKL4Q5MAI5 379 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 MLIPQ5VWP3 458 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 SULT1C3Q6IMI6 304 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 LCN10Q6JVE6 187 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 KCTD4Q8WVF5 259 aa17.65■□□□□ 0.42
PRPF40B-216ENST00000552301 THAP11Q96EK4 314 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms