RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 ERVK-10P10266 1014 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 EZRP15311 586 aaKnown RBP12.78□□□□□ -0.36
GCN1-206ENST00000549815 FBLP22087 321 aaKnown RBP12.78□□□□□ -0.36
GCN1-206ENST00000549815 GABRB3P28472 473 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 SLC26A3P40879 764 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 OCA2Q04671 838 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 DSG2Q14126 1118 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 GARNL3Q5VVW2 1013 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 KCNMB4Q86W47 210 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 PARP9Q8IXQ6 854 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 AMER3Q8N944 861 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
GCN1-206ENST00000549815 C2CD4AQ8NCU7 369 aaPredicted RBP12.78□□□□□ -0.36
GCN1-206ENST00000549815 CALML6Q8TD86 181 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 GRK7Q8WTQ7 553 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 C8orf44Q96CB5 159 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 CABS1Q96KC9 395 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 WDR77Q9BQA1 342 aaPredicted RBP12.78□□□□□ -0.36
GCN1-206ENST00000549815 FAM167BQ9BTA0 163 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 LHPPQ9H008 270 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 CCDC68Q9H2F9 335 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 PLAC1Q9HBJ0 212 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 IARS2Q9NSE4 1012 aaKnown RBP12.78□□□□□ -0.36
GCN1-206ENST00000549815 PCYOX1Q9UHG3 505 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 CNTRLQ7Z7A1 2325 aa12.78□□□□□ -0.36
GCN1-206ENST00000549815 DNALI1O14645 258 aaPredicted RBP12.77□□□□□ -0.37
GCN1-206ENST00000549815 FFAR3O14843 346 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 HAT1O14929 419 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 GPR42O15529 346 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 ZBTB14O43829 449 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 SYF2O95926 243 aaKnown RBP12.77□□□□□ -0.37
GCN1-206ENST00000549815 HPP00738 406 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 COX6A1P12074 109 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 PGAM1P18669 254 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 IVDP26440 423 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 EFNA3P52797 238 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
GCN1-206ENST00000549815 TSTA3Q13630 321 aaPredicted RBP12.77□□□□□ -0.37
GCN1-206ENST00000549815 CRYMQ14894 314 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 NR6A1Q15406 480 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 HIF1AQ16665 826 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 MSS51Q4VC12 460 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 AGAP7PQ5VUJ5 663 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 UBE2R2Q712K3 238 aaPredicted RBP12.77□□□□□ -0.37
GCN1-206ENST00000549815 PLD3Q8IV08 490 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 CNTN4Q8IWV2 1026 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 PRSS58Q8IYP2 241 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 SSC4DQ8WTU2 575 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 SLCO2A1Q92959 643 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 AGAP4Q96P64 663 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 TGIF2Q9GZN2 237 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 ILKAPQ9H0C8 392 aaPredicted RBP12.77□□□□□ -0.37
GCN1-206ENST00000549815 KCNF1Q9H3M0 494 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 ZNF160Q9HCG1 818 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 LRRC4CQ9HCJ2 640 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 C3orf18Q9UK00 162 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 ADAMTS6Q9UKP5 1117 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 CDC14AQ9UNH5 594 aa12.77□□□□□ -0.37
GCN1-206ENST00000549815 NOVA2Q9UNW9 492 aaKnown RBP12.77□□□□□ -0.37
GCN1-206ENST00000549815 MRPS2Q9Y399 296 aaKnown RBP12.77□□□□□ -0.37
GCN1-206ENST00000549815 DOPEY1Q5JWR5 2465 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 H7BY64 318 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 BANF1O75531 89 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 KLHL18O94889 574 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 ACPPP15309 386 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 PTK6Q13882 451 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 FAM53BQ14153 422 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 VN1R4Q7Z5H5 301 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 IGDCC3Q8IVU1 814 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 EEF1AKMT1Q8WVE0 214 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 PSMF1Q92530 271 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 THOC3Q96J01 351 aaKnown RBP12.76□□□□□ -0.37
GCN1-206ENST00000549815 VPS50Q96JG6 964 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 PRAP1Q96NZ9 151 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 NDNQ99608 321 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 EBNA1BP2Q99848 306 aaKnown RBP12.76□□□□□ -0.37
GCN1-206ENST00000549815 DDX47Q9H0S4 455 aaKnown RBP12.76□□□□□ -0.37
GCN1-206ENST00000549815 TMEM184CQ9NVA4 438 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 C14orf105Q9NVL8 296 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 UTP6Q9NYH9 597 aaKnown RBP12.76□□□□□ -0.37
GCN1-206ENST00000549815 MAP10Q9P2G4 905 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 TRPC4Q9UBN4 977 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 PDE10AQ9Y233 779 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 COPG1Q9Y678 874 aaKnown RBP12.76□□□□□ -0.37
GCN1-206ENST00000549815 POLEQ07864 2286 aa12.76□□□□□ -0.37
GCN1-206ENST00000549815 KCNE1BA0A087WTH5 132 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 LOC102723996A0A087X1L8 192 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 A0A0A6YYC8 382 aaPredicted RBP12.75□□□□□ -0.37
GCN1-206ENST00000549815 GOLGA6L10A0A0M3HER8 536 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 WIPF3A6NGB9 483 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 IDSB3KWA1 339 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 I3L1I5 382 aaPredicted RBP12.75□□□□□ -0.37
GCN1-206ENST00000549815 TXNDC9O14530 226 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 MAP2K7O14733 419 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 PRPF4O43172 522 aaKnown RBP eCLIP12.75□□□□□ -0.37
GCN1-206ENST00000549815 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 TSPAN12O95859 305 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 AHSGP02765 367 aa12.75□□□□□ -0.37
GCN1-206ENST00000549815 SOX11P35716 441 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms