RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ZMPSTE24O75844 475 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 GOT2P00505 430 aaKnown RBP8.38□□□□□ -1.07
CLIP1-218ENST00000545889 CD72P21854 359 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 GRIA1P42261 906 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 CDH15P55291 814 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 CRTC1Q6UUV9 634 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 KIAA0408Q6ZU52 694 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 VANGL1Q8TAA9 524 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-218ENST00000545889 PIWIL2Q8TC59 973 aaKnown RBP8.38□□□□□ -1.07
CLIP1-218ENST00000545889 ART4Q93070 314 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.07
CLIP1-218ENST00000545889 CDRT15Q96T59 188 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 CWH43Q9H720 699 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 POLR3BQ9NW08 1133 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-218ENST00000545889 ZDHHC7Q9NXF8 308 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 ZDHHC3Q9NYG2 299 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 CALML5Q9NZT1 146 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 TCAF1Q9Y4C2 921 aa8.38□□□□□ -1.07
CLIP1-218ENST00000545889 ARPC4-TTLL3A0A0A6YYG9 625 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 ANKRD34BA5PLL1 514 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 SUV39H1O43463 412 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 APBB3O95704 486 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 OAS1P00973 400 aaKnown RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 IL7RP16871 459 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 AQP1P29972 269 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 SLC10A7Q0GE19 358 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 RAPSNQ13702 412 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 STK11Q15831 433 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 Q6ZVL8 140 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 RFPL4BQ6ZWI9 263 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TDHQ8IZJ6 230 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 RDH11Q8TC12 318 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 C10orf82Q8WW14 230 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TRNT1Q96Q11 434 aaKnown RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 GFM1Q96RP9 751 aaKnown RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 GDE1Q9NZC3 331 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 NENFQ9UMX5 172 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 ST14Q9Y5Y6 855 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 DGKBQ9Y6T7 804 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 CENPXA8MT69 81 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TSPAN4O14817 238 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 HDAC3O15379 428 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 RNGTTO60942 597 aaKnown RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 IL33O95760 270 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 IL6P05231 212 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 PBX2P40425 430 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 DPP6P42658 865 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 GRK6P43250 576 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 CHRNA4P43681 627 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 PCDH1Q08174 1060 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 DNASE1L3Q13609 305 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TGFBIQ15582 683 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 PRAMEF14Q5SWL7 426 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 PRAMEF13Q5VWM6 474 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 SULT1C3Q6IMI6 304 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 MRPL43Q8N983 215 aaKnown RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 OR5M3Q8NGP4 307 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 KAT2AQ92830 837 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 IGSF8Q969P0 613 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 OR8D2Q9GZM6 311 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 PLEKHA1Q9HB21 404 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 SLAMF7Q9NQ25 335 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 IFT80Q9P2H3 777 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TCRBV7S3A2A0A539 114 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TSPAN6O43657 245 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 FHP07954 510 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 CSNK2A2P19784 350 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 MPIP34949 423 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 GSTM5P46439 218 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 ARCN1P48444 511 aaKnown RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 PTGES3Q15185 160 aaKnown RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 FAM109BQ6ICB4 259 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF730Q6ZMV8 503 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 Q6ZNX1 250 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 DCDC5Q6ZRR9 648 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 LYSMD3Q7Z3D4 306 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 OAFQ86UD1 273 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 SLC22A15Q8IZD6 547 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 ZDHHC14Q8IZN3 488 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 MPP5Q8N3R9 675 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TRIM63Q969Q1 353 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 TCEAL4Q96EI5 215 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 MFSD3Q96ES6 412 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 OLFM1Q99784 485 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 EFCAB11Q9BUY7 163 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 CAB39LQ9H9S4 337 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 B4GALT7Q9UBV7 327 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 HCFC2Q9Y5Z7 792 aa8.37□□□□□ -1.07
CLIP1-218ENST00000545889 A0A0D9SEW6 157 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 LDOC1O95751 146 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 SNRPB2P08579 225 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 THEGLP0DJG4 465 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 PGFP49763 221 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 ITGA1P56199 1179 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NRG1Q02297 640 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 UBAP2LQ14157 1087 aaKnown RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 NDUFAF6Q330K2 333 aa8.36□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF829Q3KNS6 432 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-218ENST00000545889 PM20D1Q6GTS8 502 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms