RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 HIST1H2AHQ96KK5 128 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 SPSB2Q99619 263 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 HIST1H2AJQ99878 128 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 H2AFJQ9BTM1 129 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 SYNPO2LQ9H987 977 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 ZNF304Q9HCX3 659 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 TMEM184CQ9NVA4 438 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 CUEDC1Q9NWM3 386 aaPredicted RBP16.15■□□□□ 0.18
HOXD8-204ENST00000544999 ZNF451Q9Y4E5 1061 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 PSAT1Q9Y617 370 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 CFAP46Q8IYW2 2715 aa16.15■□□□□ 0.18
HOXD8-204ENST00000544999 NUP210LQ5VU65 1888 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 PABPN1LA6NDY0 278 aaKnown RBP16.14■□□□□ 0.17
HOXD8-204ENST00000544999 VSTM2BA6NLU5 285 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 TXNDC9O14530 226 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 HAT1O14929 419 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 MMP11P24347 488 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 CSRP3P50461 194 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 AP1S2P56377 157 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 FOXL2P58012 376 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 ILF2Q12905 390 aaKnown RBP16.14■□□□□ 0.17
HOXD8-204ENST00000544999 PHKG1Q16816 387 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 AGTRAPQ6RW13 159 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 MBOAT1Q6ZNC8 495 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 STRA8Q7Z7C7 330 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 ZC3HC1Q86WB0 502 aaKnown RBP16.14■□□□□ 0.17
HOXD8-204ENST00000544999 HPS6Q86YV9 775 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 DTWD1Q8N5C7 304 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 PYROXD1Q8WU10 500 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 MVB12AQ96EY5 273 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 PDLIM5Q96HC4 596 aaKnown RBP16.14■□□□□ 0.17
HOXD8-204ENST00000544999 TRIM54Q9BYV2 358 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 P4HTMQ9NXG6 502 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 CTSFQ9UBX1 484 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 CDC14AQ9UNH5 594 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 RUVBL1Q9Y265 456 aaKnown RBP16.14■□□□□ 0.17
HOXD8-204ENST00000544999 UTP11Q9Y3A2 253 aaKnown RBP16.14■□□□□ 0.17
HOXD8-204ENST00000544999 MAU2Q9Y6X3 613 aa16.14■□□□□ 0.17
HOXD8-204ENST00000544999 FAM95CA0A1B0GW59 222 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 H7BY64 318 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 AGPSO00116 658 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 PRPF4O43172 522 aaKnown RBP eCLIP16.13■□□□□ 0.17
HOXD8-204ENST00000544999 ENO2P09104 434 aaPredicted RBP16.13■□□□□ 0.17
HOXD8-204ENST00000544999 PGGT1BP53609 377 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 KCNC4Q03721 635 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 NAE1Q13564 534 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 DCAF10Q5QP82 559 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 LCTLQ6UWM7 567 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 ZNF572Q7Z3I7 529 aaPredicted RBP16.13■□□□□ 0.17
HOXD8-204ENST00000544999 TMEM151BQ8IW70 566 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 CLEC1AQ8NC01 280 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 COL26A1Q96A83 441 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 PRAP1Q96NZ9 151 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 SMAD5Q99717 465 aaKnown RBP16.13■□□□□ 0.17
HOXD8-204ENST00000544999 NUDT9Q9BW91 350 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 SGPP1Q9BX95 441 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 PHACTR1Q9C0D0 580 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 RAB17Q9H0T7 212 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 ATG10Q9H0Y0 220 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 SOX17Q9H6I2 414 aaPredicted RBP16.13■□□□□ 0.17
HOXD8-204ENST00000544999 SAYSD1Q9NPB0 183 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 GPR83Q9NYM4 423 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 GRHL1Q9NZI5 618 aa16.13■□□□□ 0.17
HOXD8-204ENST00000544999 A6NL46 340 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 KLHL41O60662 606 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 ZNF37AP17032 561 aaPredicted RBP16.12■□□□□ 0.17
HOXD8-204ENST00000544999 FBLP22087 321 aaKnown RBP16.12■□□□□ 0.17
HOXD8-204ENST00000544999 RPS15AP62244 130 aaKnown RBP16.12■□□□□ 0.17
HOXD8-204ENST00000544999 OCA2Q04671 838 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 HKDC1Q2TB90 917 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 CAPN13Q6MZZ7 669 aaPredicted RBP16.12■□□□□ 0.17
HOXD8-204ENST00000544999 TMEM207Q6UWW9 146 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 C17orf64Q86WR6 236 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 ARHGEF39Q8N4T4 335 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 NKAPQ8N5F7 415 aaKnown RBP16.12■□□□□ 0.17
HOXD8-204ENST00000544999 ATL1Q8WXF7 558 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 ANKRD7Q92527 254 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 FBXL8Q96CD0 374 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 THAP11Q96EK4 314 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 HAUS8Q9BT25 410 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 RHOJQ9H4E5 214 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 CLMPQ9H6B4 373 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 SEMA3GQ9NS98 782 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 ARL15Q9NXU5 204 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 ZNF282Q9UDV7 671 aaPredicted RBP16.12■□□□□ 0.17
HOXD8-204ENST00000544999 CDC23Q9UJX2 597 aa16.12■□□□□ 0.17
HOXD8-204ENST00000544999 NOVA2Q9UNW9 492 aaKnown RBP16.12■□□□□ 0.17
HOXD8-204ENST00000544999 IGLV3-12A0A075B6K2 115 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 KCNE1BA0A087WTH5 132 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 SOCS6O14544 535 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 P2RX6O15547 441 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 DPM1O60762 260 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 GSTA2P09210 222 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 SAT1P21673 171 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 SSTR1P30872 391 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 CSNK1G2P78368 415 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 CAV1Q03135 178 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 CKAP4Q07065 602 aaKnown RBP16.11■□□□□ 0.17
HOXD8-204ENST00000544999 DSG2Q14126 1118 aa16.11■□□□□ 0.17
HOXD8-204ENST00000544999 FAM53BQ14153 422 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms