RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 BCORP1Q8N888 145 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 OR9A1PQ8NGU1 263 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 SOCS4Q8WXH5 440 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ISG20Q96AZ6 181 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 OPTNQ96CV9 577 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 CDKN2AIPNLQ96HQ2 116 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 VCPIP1Q96JH7 1222 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 CAPNS2Q96L46 248 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 CATSPER2Q96P56 530 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 FYTTD1Q96QD9 318 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 MTMR9Q96QG7 549 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 BBS4Q96RK4 519 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 GPHA2Q96T91 129 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 PINK1Q9BXM7 581 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 RNF26Q9BY78 433 aaPredicted RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 TKTL2Q9H0I9 626 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 FN3KRPQ9HA64 309 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 UPF2Q9HAU5 1272 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 VAT1LQ9HCJ6 419 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 NYAP2Q9P242 653 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ATXN10Q9UBB4 475 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 NLKQ9UBE8 527 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 DHDHQ9UQ10 334 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ZNFX1Q9P2E3 1918 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 MGAMO43451 1857 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 SMCHD1A6NHR9 2005 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 A0A0G2JLL6 359 aaPredicted RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 C17orf102A2RUQ5 167 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 FAM90A10PA6NDY2 464 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 MANSC4A6NHS7 340 aaPredicted RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 OR52A4PA6NMU1 304 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 C9orf172C9J069 976 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 MCIDASD6RGH6 385 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 E7EWF7 191 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 GOLGA8SH3BPF8 625 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 K7ERQ8 282 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 PPM1DO15297 605 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 ZNF264O43296 627 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 HOXA3O43365 443 aaPredicted RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 KLK8O60259 260 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 SNNO75324 88 aaPredicted RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 SPDEFO95238 335 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 HLA-DQA2P01906 255 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 RAB40ALP0C0E4 278 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 F3P13726 295 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 ZNF18P17022 549 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 ZNF37AP17032 561 aaPredicted RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 LBPP18428 481 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 CTNNA2P26232 953 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 U2AF2P26368 475 aaKnown RBP eCLIP5.32□□□□□ -1.56
DDB1-219ENST00000541513 COL8A1P27658 744 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 PSMB4P28070 264 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 HTR2AP28223 471 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 MMP13P45452 471 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 CD97P48960 835 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 MFAP3P55082 362 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 BACE1P56817 501 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 SLC37A1P57057 533 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 CLDN2P57739 230 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 ARPC4P59998 168 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 MC2RQ01718 297 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 FOLH1Q04609 750 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 HGFACQ04756 655 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 PRKCQQ04759 706 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 PPIDQ08752 370 aaKnown RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 RIN1Q13671 783 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 USP10Q14694 798 aaKnown RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 HLXQ14774 488 aaPredicted RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 CSRP2Q16527 193 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 ANKRD55Q3KP44 614 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 USH1GQ495M9 461 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 CCDC14Q49A88 953 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 LRRC73Q5JTD7 316 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 DCAF12L2Q5VW00 463 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 NCR3LG1Q68D85 454 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 STOX1Q6ZVD7 989 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 EFL1Q7Z2Z2 1120 aaKnown RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 TECPR1Q7Z6L1 1165 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 ADGRE4PQ86SQ3 457 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 CIR1Q86X95 450 aaPredicted RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 NRROSQ86YC3 692 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 CAMK1DQ8IU85 385 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 GRAMD2AQ8IUY3 354 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 CD302Q8IX05 232 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 MB21D2Q8IYB1 491 aaPredicted RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 SLC43A2Q8N370 569 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 PNPLA1Q8N8W4 532 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 EXD3Q8N9H8 876 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 BBS1Q8NFJ9 593 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 EXD1Q8NHP7 514 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 ESR2Q92731 530 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 DPF1Q92782 380 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 KAT2BQ92831 832 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 RHBDF1Q96CC6 855 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 LINGO1Q96FE5 620 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 THOC1Q96FV9 657 aaKnown RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 MSANTD3Q96H12 275 aa5.32□□□□□ -1.56
DDB1-219ENST00000541513 THOC3Q96J01 351 aaKnown RBP5.32□□□□□ -1.56
DDB1-219ENST00000541513 EGLN2Q96KS0 407 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms