RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TSNARE1Q96NA8 513 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 TRAPPC9Q96Q05 1148 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 CCDC177Q9NQR7 707 aaPredicted RBP16.05■□□□□ 0.16
UBC-208ENST00000540700 WWOXQ9NZC7 414 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 SLC22A14Q9Y267 594 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 PLLPQ9Y342 182 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 SPTAN1Q13813 2472 aaKnown RBP16.05■□□□□ 0.16
UBC-208ENST00000540700 A0A0J9YY10 115 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 SYCE1LA8MT33 242 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 MATN2O00339 956 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 WDR47O94967 919 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 ANKRD34CP0C6C1 535 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 FAM87AP0C7U9 286 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 NPPBP16860 134 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 MAGP20916 626 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 CDH3P22223 829 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 RPA3P35244 121 aaPredicted RBP16.04■□□□□ 0.16
UBC-208ENST00000540700 HNMTP50135 292 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 MAGOHP61326 146 aaKnown RBP16.04■□□□□ 0.16
UBC-208ENST00000540700 KCNAB1Q14722 419 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 SF1Q15637 639 aaKnown RBP16.04■□□□□ 0.16
UBC-208ENST00000540700 ICE2Q659A1 982 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 RPS27LQ71UM5 84 aaKnown RBP16.04■□□□□ 0.16
UBC-208ENST00000540700 CROCCP2Q86T23 111 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 THOC6Q86W42 341 aaKnown RBP16.04■□□□□ 0.16
UBC-208ENST00000540700 FBXO39Q8N4B4 442 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 TCP10LQ8TDR4 215 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 ATL1Q8WXF7 558 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 KLHL6Q8WZ60 621 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 SMC6Q96SB8 1091 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 RUFY1Q96T51 708 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 CD180Q99467 661 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 DPYSL5Q9BPU6 564 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 ZNF768Q9H5H4 540 aaKnown RBP16.04■□□□□ 0.16
UBC-208ENST00000540700 FAM60AQ9NP50 221 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 C1GALT1Q9NS00 363 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 PCDHB11Q9Y5F2 797 aa16.04■□□□□ 0.16
UBC-208ENST00000540700 KIF26BQ2KJY2 2108 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 ZNF839A8K0R7 811 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 RASSF9O75901 435 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 CTSBP07858 339 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 GFAPP14136 432 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 HGFP14210 728 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 GRIA3P42263 894 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 ETV4P43268 484 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 CCT5P48643 541 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 ALDH18A1P54886 795 aaKnown RBP16.03■□□□□ 0.16
UBC-208ENST00000540700 SH3BP2P78314 561 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 PRDX1Q06830 199 aaKnown RBP16.03■□□□□ 0.16
UBC-208ENST00000540700 TGIF1Q15583 401 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 AGBL2Q5U5Z8 902 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 CAPN13Q6MZZ7 669 aaPredicted RBP16.03■□□□□ 0.16
UBC-208ENST00000540700 LCTLQ6UWM7 567 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 TCAIMQ8N3R3 496 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 ARMC2Q8NEN0 867 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 SLC41A2Q96JW4 573 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 TMEM74Q96NL1 305 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 FAM111AQ96PZ2 611 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 CD244Q9BZW8 370 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 SPNS1Q9H2V7 528 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 STARD5Q9NSY2 213 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 OCIAD1Q9NX40 245 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 SIDT1Q9NXL6 827 aaKnown RBP16.03■□□□□ 0.16
UBC-208ENST00000540700 SENP1Q9P0U3 644 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 GRID1Q9ULK0 1009 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 ACTL7BQ9Y614 415 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 UNC13CQ8NB66 2214 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 ANKRD12Q6UB98 2062 aa16.03■□□□□ 0.16
UBC-208ENST00000540700 UNC79Q9P2D8 2635 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 USP9XQ93008 2570 aaPredicted RBP16.02■□□□□ 0.16
UBC-208ENST00000540700 CCDC187A0A096LP49 1063 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 PABPN1LA6NDY0 278 aaKnown RBP16.02■□□□□ 0.16
UBC-208ENST00000540700 CCNT2O60583 730 aaKnown RBP16.02■□□□□ 0.16
UBC-208ENST00000540700 RPS17P08708 135 aaKnown RBP16.02■□□□□ 0.16
UBC-208ENST00000540700 CCL4P13236 92 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 SLC5A2P31639 672 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 ETV5P41161 510 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 GABRA4P48169 554 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 PCLAFQ15004 111 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 PCBP2Q15366 365 aaKnown RBP eCLIP16.02■□□□□ 0.16
UBC-208ENST00000540700 CATSPEREQ5SY80 951 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 THEMIS2Q5TEJ8 643 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 ZNF425Q6IV72 752 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 ZYG11AQ6WRX3 759 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 BMPERQ8N8U9 685 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 C19orf47Q8N9M1 422 aaKnown RBP16.02■□□□□ 0.16
UBC-208ENST00000540700 NEIL2Q969S2 332 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 PMEPA1Q969W9 287 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 SLC22A18Q96BI1 424 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 NSUN5Q96P11 429 aaKnown RBP16.02■□□□□ 0.16
UBC-208ENST00000540700 FCRL4Q96PJ5 515 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 TMEM237Q96Q45 408 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 SSU72Q9NP77 194 aaKnown RBP16.02■□□□□ 0.16
UBC-208ENST00000540700 KLK4Q9Y5K2 254 aa16.02■□□□□ 0.16
UBC-208ENST00000540700 NBASA2RRP1 2371 aa16.02■□□□□ 0.15
UBC-208ENST00000540700 SNRNP200O75643 2136 aaKnown RBP16.01■□□□□ 0.15
UBC-208ENST00000540700 E7EQ34 232 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 STX16-NPEPL1H3BU86 382 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 E2F3O00716 465 aa16.01■□□□□ 0.15
UBC-208ENST00000540700 STX16O14662 325 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms