RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 VITQ6UXI7 678 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 TFAP2EQ6VUC0 442 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 DENND6AQ8IWF6 608 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 SCML4Q8N228 414 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 RBM15BQ8NDT2 890 aaKnown RBP12.25□□□□□ -0.45
DDX55-206ENST00000539934 Q8NFD4 153 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 HDAC10Q969S8 669 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 RTP4Q96DX8 246 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 DUS3LQ96G46 650 aaKnown RBP12.25□□□□□ -0.45
DDX55-206ENST00000539934 PPM1MQ96MI6 270 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 AGAP4Q96P64 663 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 CASD1Q96PB1 797 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 LMF1Q96S06 567 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 COLEC11Q9BWP8 271 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 PITPNM3Q9BZ71 974 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 OR51V1Q9H2C8 321 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 WDCPQ9H6R7 721 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 VPS28Q9UK41 221 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 FBXW11Q9UKB1 542 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 CRYL1Q9Y2S2 319 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 MFHAS1Q9Y4C4 1052 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 TNPO3Q9Y5L0 923 aaKnown RBP12.25□□□□□ -0.45
DDX55-206ENST00000539934 R4GN57 208 aa12.25□□□□□ -0.45
DDX55-206ENST00000539934 MAP1BP46821 2468 aaKnown RBP12.24□□□□□ -0.45
DDX55-206ENST00000539934 A0A1B0GV90 55 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 K7ERQ8 282 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 STK25O00506 426 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 GIPC1O14908 333 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 MFSD11O43934 449 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 UGDHO60701 494 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 BANF1O75531 89 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 NSA2O95478 260 aaKnown RBP12.24□□□□□ -0.45
DDX55-206ENST00000539934 HNRNPLP14866 589 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX55-206ENST00000539934 PEX2P28328 305 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 GABRB3P28472 473 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 PGM1P36871 562 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 TPI1P60174 286 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 IFI35P80217 286 aaPredicted RBP12.24□□□□□ -0.45
DDX55-206ENST00000539934 SCAPQ12770 1279 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 CTXN3Q4LDR2 81 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 LIPNQ5VXI9 398 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 CHSY3Q70JA7 882 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 CLNKQ7Z7G1 428 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 ZDHHC13Q8IUH4 622 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 DSELQ8IZU8 1212 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 PNPT1Q8TCS8 783 aaKnown RBP12.24□□□□□ -0.45
DDX55-206ENST00000539934 TFB1MQ8WVM0 346 aaKnown RBP12.24□□□□□ -0.45
DDX55-206ENST00000539934 PTERQ96BW5 349 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 ZHX1-C8orf76Q96EF9 292 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 NSL1Q96IY1 281 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 QKIQ96PU8 341 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX55-206ENST00000539934 CYTH2Q99418 400 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 AGAP2Q99490 1192 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 LRRC40Q9H9A6 602 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 DCDC2Q9UHG0 476 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 BTNL2Q9UIR0 455 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 DHRS7Q9Y394 339 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 HSPE1-MOB4S4R3N1 261 aa12.24□□□□□ -0.45
DDX55-206ENST00000539934 EXOC1LA0A1B0GW35 172 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 MARCH11A6NNE9 402 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 FOXO6A8MYZ6 492 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 I3L521 148 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 CASC3O15234 703 aaKnown RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 CHADO15335 359 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 MAPK3P27361 379 aaPredicted RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 PCGF2P35227 344 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 PUDPQ08623 228 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ETFDHQ16134 617 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 FAM98BQ52LJ0 330 aaKnown RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 FNBP1LQ5T0N5 605 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 FAXCQ5TGI0 409 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 CES5AQ6NT32 575 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ZCCHC12Q6PEW1 402 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 SSX9Q7RTT3 188 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 DPPA2Q7Z7J5 298 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 SH3YL1Q96HL8 342 aaPredicted RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 RNF170Q96K19 258 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 PGLYRP2Q96PD5 576 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 PANX3Q96QZ0 392 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 CCNL2Q96S94 520 aaPredicted RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 SERPINI1Q99574 410 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 TKTL2Q9H0I9 626 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 LDAHQ9H6V9 325 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ABCC13Q9NSE7 274 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 AP4B1Q9Y6B7 739 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 SF3B1O75533 1304 aaKnown RBP eCLIP12.23□□□□□ -0.453e-6■■■■■ 88.4
DDX55-206ENST00000539934 MYO18AQ92614 2054 aaKnown RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 TOX3O15405 576 aaPredicted RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 TGM6O95932 706 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 CNPP09543 421 aaKnown RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 ACADMP11310 421 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 CD247P20963 164 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 CBLP22681 906 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 SLC11A1P49279 550 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ARPP19P56211 112 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 YBEYP58557 167 aaPredicted RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 CTBSQ01459 385 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 MTM1Q13496 603 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 DNASE1L3Q13609 305 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms