RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 COILP38432 576 aaPredicted RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 CSE1LP55060 971 aaKnown RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 SARNPP82979 210 aaKnown RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 SRSF3P84103 164 aaKnown RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 DNASE1L3Q13609 305 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 TMED2Q15363 201 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 GPR19Q15760 415 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 KCTD19Q17RG1 926 aaPredicted RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 TYSND1Q2T9J0 566 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 RNF187Q5TA31 235 aaPredicted RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 ANKRD22Q5VYY1 191 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 PTRHD1Q6GMV3 140 aaKnown RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 MRNIPQ6NTE8 343 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 BORAQ6PGQ7 559 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 FBXO38Q6PIJ6 1188 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 SPESP1Q6UW49 350 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 LDB1Q86U70 411 aaPredicted RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 CAND1Q86VP6 1230 aaKnown RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 LRRC6Q86X45 466 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 VRK3Q8IV63 474 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 DCUN1D3Q8IWE4 304 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 SLC22A15Q8IZD6 547 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 OTUD6BQ8N6M0 293 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 MCUQ8NE86 351 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 OR5K2Q8NHB8 316 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 ACTRT1Q8TDG2 376 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 GRK7Q8WTQ7 553 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 CT55Q8WUE5 264 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 CPT1BQ92523 772 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 ZNF501Q96CX3 271 aaPredicted RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 MFSD3Q96ES6 412 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 Q96M66 194 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 CATSPER2Q96P56 530 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 OSBPL9Q96SU4 736 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 CARD6Q9BX69 1037 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 AP1M1Q9BXS5 423 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 TWSG1Q9GZX9 223 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 P2RY12Q9H244 342 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 FANCEQ9HB96 536 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 XAB2Q9HCS7 855 aaKnown RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 KCND1Q9NSA2 647 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 OR6C2Q9NZP2 312 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 SAMD15Q9P1V8 674 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 POLG2Q9UHN1 485 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 GNPTGQ9UJJ9 305 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 ANAPC5Q9UJX4 755 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 SNX12Q9UMY4 172 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 CDYLQ9Y232 598 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 NEU2Q9Y3R4 380 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 PCDHGA6Q9Y5G7 932 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 MED13Q9UHV7 2174 aa6.79□□□□□ -1.32
YBX3-206ENST00000536823 UBR5O95071 2799 aaPredicted RBP6.79□□□□□ -1.32
YBX3-206ENST00000536823 SPTAN1Q13813 2472 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 GOLGA6L10A0A0M3HER8 536 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 PIPSLA2A3N6 862 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 IQCF5A8MTL0 148 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 C21orf140B9A014 251 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TMEM150CB9EJG8 249 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 NKX2-8O15522 239 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 KDM1AO60341 852 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 SLCO2B1O94956 709 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 VAPBO95292 243 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TP53P04637 393 aaPredicted RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 RPN2P04844 631 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 CHRM5P08912 532 aaPredicted RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 TPBGLP0DKB5 382 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 PVRP15151 417 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 UGT2B7P16662 529 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 PAMP19021 973 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TCN2P20062 427 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 OGNP20774 298 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 PKLRP30613 574 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 DLSTP36957 453 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 MAGEA3P43357 314 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TERF1P54274 439 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 EIF3BP55884 814 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 HSPA14Q0VDF9 509 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 ABRQ12979 859 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 GBX1Q14549 363 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 KIR2DS3Q14952 304 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 CTSL3PQ5NE16 218 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 CASC4Q6P4E1 433 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 CCDC137Q6PK04 289 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 CES3Q6UWW8 571 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 UNC5DQ6UXZ4 953 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TRIM73Q86UV7 250 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 JAZF1Q86VZ6 243 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TMEM126BQ8IUX1 230 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 KRT222Q8N1A0 295 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 ASZ1Q8WWH4 475 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 LPGAT1Q92604 370 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 PDLIM2Q96JY6 352 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 LRFN5Q96NI6 719 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 SERPINB12Q96P63 405 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TRAPPC9Q96Q05 1148 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 PANX3Q96QZ0 392 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 OR2A14Q96R47 310 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 CHRNA10Q9GZZ6 450 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 ADNPQ9H2P0 1102 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms