RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 B4GALT2O60909 372 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 NR1H2P55055 460 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 ZNF846Q147U1 533 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 SLC5A9Q2M3M2 681 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 TRMT10BQ6PF06 316 aaKnown RBP16.58■□□□□ 0.25
BEST1-203ENST00000524877 JAZF1Q86VZ6 243 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 TDRPQ86YL5 185 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 SLCO2A1Q92959 643 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 MRGPRX2Q96LB1 330 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 POPDC3Q9HBV1 291 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.25
BEST1-203ENST00000524877 VPS29Q9UBQ0 182 aa16.58■□□□□ 0.25
BEST1-203ENST00000524877 BCAT2O15382 392 aaPredicted RBP16.58■□□□□ 0.24
BEST1-203ENST00000524877 EGFLAMQ63HQ2 1017 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 CDADC1Q9BWV3 514 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 ADAM30Q9UKF2 790 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 ING4Q9UNL4 249 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 DDX60LQ5H9U9 1706 aaKnown RBP16.58■□□□□ 0.24
BEST1-203ENST00000524877 LDB2O43679 373 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 IL6P05231 212 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 DCAF12L1Q5VU92 463 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 HMBOX1Q6NT76 420 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 PIK3C3Q8NEB9 887 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 CEP76Q8TAP6 659 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 ESAMQ96AP7 390 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 LRRC46Q96FV0 321 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 ZNF354BQ96LW1 612 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 TCRBV7S3A2A0A539 114 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 DUXAA6NLW8 204 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 CDC7O00311 574 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 TRIM38O00635 465 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 REM1O75628 298 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 AGR2O95994 175 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 TCEA1P23193 301 aaKnown RBP16.58■□□□□ 0.24
BEST1-203ENST00000524877 PRKCHP24723 683 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 VBP1P61758 197 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 KCTD19Q17RG1 926 aaPredicted RBP16.58■□□□□ 0.24
BEST1-203ENST00000524877 KLHL6Q8WZ60 621 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 KCNJ9Q92806 393 aa16.58■□□□□ 0.24
BEST1-203ENST00000524877 HOPXQ9BPY8 73 aaPredicted RBP16.58■□□□□ 0.24
BEST1-203ENST00000524877 DRGXA6NNA5 263 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 XKRYO14609 159 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 YKT6O15498 198 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 GALNT7Q86SF2 657 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 SMPDL3BQ92485 455 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 PTCD3Q96EY7 689 aaKnown RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 MMABQ96EY8 250 aaPredicted RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 RNF38Q9H0F5 515 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 SAMD4AQ9UPU9 718 aaKnown RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 AGPSO00116 658 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 IMPDH1P20839 514 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 SPINT3P49223 89 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 BHLHE22Q8NFJ8 381 aaPredicted RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 OR6Y1Q8NGX8 325 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 VANGL1Q8TAA9 524 aaPredicted RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 PNPT1Q8TCS8 783 aaKnown RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 CFHR5Q9BXR6 569 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 PIP5K1BO14986 540 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 CDH1P12830 882 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 SLC6A4P31645 630 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 CLCN7P51798 805 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 RAB15P59190 212 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 RPS14P62263 151 aaKnown RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 TRAF3Q13114 568 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 UBAP2LQ14157 1087 aaKnown RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 RAB41Q5JT25 222 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 DPPA4Q7L190 304 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 C12orf40Q86WS4 652 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 NPAS3Q8IXF0 933 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 IQCF2Q8IXL9 164 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 OFCC1Q8IZS5 231 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 CPEB1Q9BZB8 566 aaKnown RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 KLRF1Q9NZS2 232 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 IFT80Q9P2H3 777 aaPredicted RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 RGS8P57771 180 aaPredicted RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 RHAGQ02094 409 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 COX10Q12887 443 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 RTL4Q6ZR62 310 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 C2CD4AQ8NCU7 369 aaPredicted RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 SLC47A1Q96FL8 570 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 XKR8Q9H6D3 395 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 ZNF282Q9UDV7 671 aaPredicted RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 MAGEL2Q9UJ55 1249 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 PLIN3O60664 434 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 GIMD1P0DJR0 217 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 CD38P28907 300 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 GSSP48637 474 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 DPY19L1Q2PZI1 675 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 ARL13AQ5H913 290 aaPredicted RBP16.57■□□□□ 0.24
BEST1-203ENST00000524877 LINC01465Q8N7H1 131 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 MNTQ99583 582 aa16.57■□□□□ 0.24
BEST1-203ENST00000524877 MYL12BO14950 172 aa16.56■□□□□ 0.24
BEST1-203ENST00000524877 SMNDC1O75940 238 aaKnown RBP eCLIP16.56■□□□□ 0.24
BEST1-203ENST00000524877 IRF9Q00978 393 aa16.56■□□□□ 0.24
BEST1-203ENST00000524877 BLMHQ13867 455 aa16.56■□□□□ 0.24
BEST1-203ENST00000524877 TMIGD1Q6UXZ0 262 aa16.56■□□□□ 0.24
BEST1-203ENST00000524877 USP53Q70EK8 1073 aa16.56■□□□□ 0.24
BEST1-203ENST00000524877 ASPGQ86U10 573 aa16.56■□□□□ 0.24
BEST1-203ENST00000524877 PIM3Q86V86 326 aa16.56■□□□□ 0.24
BEST1-203ENST00000524877 EDAQ92838 391 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms