RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	PARP15	Q460N3	678 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	FBXO43	Q4G163	708 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	FAM98B	Q52LJ0	330 aa	Known RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CTSL3P	Q5NE16	218 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZNF691	Q5VV52	312 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	EGFLAM	Q63HQ2	1017 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	SULT1C3	Q6IMI6	304 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	LETMD1	Q6P1Q0	360 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	DET1	Q7L5Y6	550 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PRSS48	Q7RTY5	328 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	IFNE	Q86WN2	208 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CALHM3	Q86XJ0	350 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	MSRB3	Q8IXL7	192 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	ADGRG2	Q8IZP9	1017 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CARNMT1	Q8N4J0	409 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CAMKK1	Q8N5S9	505 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	FAM86B1	Q8N7N1	296 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PIK3C3	Q8NEB9	887 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	OR5K1	Q8NHB7	308 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CD200R1	Q8TD46	325 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	IGSF8	Q969P0	613 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	RHBDF1	Q96CC6	855 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	YIPF6	Q96EC8	236 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CDKN2AIPNL	Q96HQ2	116 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	C8orf48	Q96LL4	319 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	NSMCE3	Q96MG7	304 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	RNF145	Q96MT1	663 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	SIGLEC11	Q96RL6	698 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	SEPHS2	Q99611	448 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	FUNDC2	Q9BWH2	189 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	WDR12	Q9GZL7	423 aa	Known RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	POLR1E	Q9GZS1	481 aa	Known RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	RNF38	Q9H0F5	515 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	MAGIX	Q9H6Y5	334 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	SEMA4B	Q9NPR2	832 aa	Predicted RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	FBXO8	Q9NRD0	319 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	SEMA4G	Q9NTN9	838 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	TAS2R13	Q9NYV9	303 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	ITGB1BP2	Q9UKP3	347 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PAIP2B	Q9ULR5	123 aa	Known RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PDE10A	Q9Y233	779 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZNF711	Q9Y462	761 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PCDHGA8	Q9Y5G5	932 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	SPO11	Q9Y5K1	396 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	WNT6	Q9Y6F9	365 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CACNA1A	O00555	2505 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	NOTCH4	Q99466	2003 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CCDC163	A0A0D9SF12	145 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	MED19	A0JLT2	244 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	TTC36	A6NLP5	189 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	CLDN25	C9JDP6	229 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	LEFTY2	O00292	366 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	KPNA4	O00629	521 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	AQP9	O43315	295 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	MRPS14	O60783	128 aa	Known RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	GJB3	O75712	270 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	SCEL	O95171	688 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	NFATC1	O95644	943 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	CHEK2	O96017	543 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	HOXB6	P17509	224 aa	Known RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	PFKL	P17858	780 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	CR2	P20023	1033 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	GRN	P28799	593 aa	Known RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	HPCAL1	P37235	193 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	DCT	P40126	519 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	HAL	P42357	657 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	MAGEA2	P43356	314 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	MAPK10	P53779	464 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	MTPN	P58546	118 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ISL1	P61371	349 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZXDB	P98169	803 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	CHRNB3	Q05901	458 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	TAF10	Q12962	218 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	TRAF3	Q13114	568 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ATP1A4	Q13733	1029 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	CSRP2	Q16527	193 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	CYP2A13	Q16696	494 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	GEN1	Q17RS7	908 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZIK1	Q3SY52	487 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	FUT11	Q495W5	492 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	AGAP7P	Q5VUJ5	663 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	GRAMD4	Q6IC98	578 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	FBXL22	Q6P050	247 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	C16orf87	Q6PH81	154 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	CYP20A1	Q6UW02	462 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ENPP6	Q6UWR7	440 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	TMEM179B	Q7Z7N9	219 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	RYBP	Q8N488	228 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ATP6V0D2	Q8N8Y2	350 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	BPIFB6	Q8NFQ5	453 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	RPLP0P6	Q8NHW5	317 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	FAR1	Q8WVX9	515 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	REXO5	Q96IC2	774 aa	Known RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	SPACA7	Q96KW9	195 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZNF300	Q96RE9	604 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	GPR21	Q99679	349 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	SEMA3C	Q99985	751 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	CPPED1	Q9BRF8	314 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	TTLL2	Q9BWV7	592 aa		7.6	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms