RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 ERVPABLB-1P60509 514 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 RAB10P61026 200 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 SLC25A3Q00325 362 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 POU4F1Q01851 419 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 STX5Q13190 355 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 TRA2AQ13595 282 aaKnown RBP eCLIP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CYLC2Q14093 348 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 MAP7Q14244 749 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 USP10Q14694 798 aaKnown RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PLCL1Q15111 1095 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 FAM83EQ2M2I3 478 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 MMEL1Q495T6 779 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 SPATS1Q496A3 300 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 AARS2Q5JTZ9 985 aaKnown RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 SNAP47Q5SQN1 464 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 OGFRL1Q5TC84 451 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 LYPLAL1Q5VWZ2 237 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 KIAA0930Q6ICG6 404 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 C16orf46Q6P387 395 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 TMEM71Q6P5X7 295 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 WDR74Q6RFH5 385 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 LDB1Q86U70 411 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PDZD3Q86UT5 571 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 RBM12BQ8IXT5 1001 aaKnown RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 LSMEM2Q8N112 164 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PQLC1Q8N2U9 271 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 OR4L1Q8NH43 312 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CEP70Q8NHQ1 597 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 ZNF483Q8TF39 744 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 NCSTNQ92542 709 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 FGF11Q92914 225 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PMEPA1Q969W9 287 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 MFSD3Q96ES6 412 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 LRGUKQ96M69 825 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 ZNF578Q96N58 590 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 SLC46A1Q96NT5 459 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 INSM2Q96T92 566 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CMKLR1Q99788 373 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 DPYSL5Q9BPU6 564 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 MRPL57Q9BQC6 102 aaKnown RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CCM2Q9BSQ5 444 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 EFHD1Q9BUP0 239 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 C20orf27Q9GZN8 174 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 OR52A5Q9H2C5 316 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 MRPL46Q9H2W6 279 aaKnown RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 C8orf4Q9NR00 106 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CATSPERZQ9NTU4 200 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PNPOQ9NVS9 261 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 KLHL3Q9UH77 587 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 ACSL5Q9ULC5 683 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 DTNAQ9Y4J8 743 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PSAT1Q9Y617 370 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PTPRQQ9UMZ3 2332 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 ADAMTS20P59510 1910 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 ZZEF1O43149 2961 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 A0A087WV48 116 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 CCDC189A1A4V9 331 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 BBIP1A8MTZ0 92 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 GOLGA8TH3BQL2 631 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 QSOX1O00391 747 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 GPR37O15354 613 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 PRAMEF10O60809 474 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 VAPBO95292 243 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 TNFAIP8O95379 198 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 C9P02748 559 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 RBP1P09455 135 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 GSTM1P09488 218 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 PABPC4LP0CB38 370 aaKnown RBP6.59□□□□□ -1.35
SPIDR-218ENST00000522222 AMD1P17707 334 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 ITGB6P18564 788 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 ME2P23368 584 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 ATP5F1P24539 256 aaPredicted RBP6.59□□□□□ -1.35
SPIDR-218ENST00000522222 PIK3R1P27986 724 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 PDHA2P29803 388 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 SLC5A2P31639 672 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 EIF2S3P41091 472 aaKnown RBP6.59□□□□□ -1.35
SPIDR-218ENST00000522222 LEPRP48357 1165 aaKnown RBP6.59□□□□□ -1.35
SPIDR-218ENST00000522222 CD151P48509 253 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 NUDT2P50583 147 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 ATP4BP51164 291 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 CHN2P52757 468 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 MAPK10P53779 464 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 PPP1CAP62136 330 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 GSTM4Q03013 218 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 TRAP1Q12931 704 aaKnown RBP6.59□□□□□ -1.35
SPIDR-218ENST00000522222 ART3Q13508 389 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 CCNIQ14094 377 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 BOP1Q14137 746 aaKnown RBP6.59□□□□□ -1.35
SPIDR-218ENST00000522222 FLOT2Q14254 428 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 SQLEQ14534 574 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 TRIP10Q15642 601 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 TYSND1Q2T9J0 566 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 SYTL3Q4VX76 610 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 LIN52Q52LA3 116 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 CES4AQ5XG92 561 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 LRRC8EQ6NSJ5 796 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 NAPRTQ6XQN6 538 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 HACD2Q6Y1H2 254 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 CERS6Q6ZMG9 384 aa6.59□□□□□ -1.35
SPIDR-218ENST00000522222 MAVSQ7Z434 540 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms