RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PRRG4Q9BZD6 226 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 VN1R1Q9GZP7 353 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 LSG1Q9H089 658 aaKnown RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 GKN1Q9NS71 199 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 IARS2Q9NSE4 1012 aaKnown RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 OCIAD1Q9NX40 245 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 TRPC4Q9UBN4 977 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 FBXL5Q9UKA1 691 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 POU2F3Q9UKI9 436 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PCDHA7Q9UN72 937 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 STX8Q9UNK0 236 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 ITM2BQ9Y287 266 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PXDNLA1KZ92 1463 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 INSRP06213 1382 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 TRAV24A0A0B4J272 114 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 C13orf42A0A1B0GVH6 325 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 A0A1W2PRB8 838 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 KBTBD13C9JR72 458 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF587BE7ETH6 402 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 PROB1E7EW31 1015 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 PGRMC2O15173 223 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZBTB14O43829 449 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 RNASEH1O60930 286 aaKnown RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 RPS6KA5O75582 802 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 RAD51DO75771 328 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ATP6AP2O75787 350 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 OLFM2O95897 454 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLC16A8O95907 504 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 TOMM40O96008 361 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 PTMAP06454 111 aaKnown RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 HMOX1P09601 288 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 C8orf89P0DMQ9 161 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 HAPLN1P10915 354 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ACP2P11117 423 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ITGA2P17301 1181 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 LBPP18428 481 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 EPORP19235 508 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SCP2P22307 547 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CBLP22681 906 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 TNFRSF8P28908 595 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CCND3P30281 292 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 IL15P40933 162 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CDX1P47902 265 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CLK1P49759 484 aaKnown RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 NME5P56597 212 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 GSDMDP57764 484 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 C21orf58P58505 322 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 TUBA1BP68363 451 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CX3CL1P78423 397 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 RELQ04864 619 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ILF2Q12905 390 aaKnown RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 DLG1Q12959 904 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 NPRL3Q12980 569 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 RPS6KA1Q15418 735 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 NPTX1Q15818 432 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 PKN2Q16513 984 aaKnown RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CTU2Q2VPK5 515 aaKnown RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 IQCCQ4KMZ1 466 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 LACTB2Q53H82 288 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 LBHQ53QV2 105 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 IRAK1BP1Q5VVH5 260 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CYB5D1Q6P9G0 228 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CNSTQ6PJW8 725 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 NHLRC1Q6VVB1 395 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF517Q6ZMY9 492 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SATL1Q86VE3 508 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 AMIGO1Q86WK6 493 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SFR1Q86XK3 245 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SIAH3Q8IW03 269 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 MUC20Q8N307 709 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 TRIML1Q8N9V2 468 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SMRP1Q8NCR6 262 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 NPEPL1Q8NDH3 523 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 LPCAT1Q8NF37 534 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 OR13J1Q8NGT2 312 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 IRGQQ8WZA9 623 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 FIG4Q92562 907 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CENPTQ96BT3 561 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SNRNP40Q96DI7 357 aaKnown RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SGF29Q96ES7 293 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 KLHL5Q96PQ7 755 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 NTPCRQ9BSD7 190 aaKnown RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 PI4K2AQ9BTU6 479 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 CACNG6Q9BXT2 260 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SEZ6LQ9BYH1 1024 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 PANK2Q9BZ23 570 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 TM6SF1Q9BZW5 370 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 MIS12Q9H081 205 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 THAP9Q9H5L6 903 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 FKRPQ9H9S5 495 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 GSN-AS1Q9NRJ2 163 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 OLFML3Q9NRN5 406 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 COMMD8Q9NX08 183 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLCO1C1Q9NYB5 712 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 AKAP7Q9P0M2 348 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 ODF2LQ9ULJ1 636 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 DLGAP4Q9Y2H0 992 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 JRKLQ9Y4A0 524 aa3.03□□□□□ -1.92
TRAPPC11-205ENST00000506426 PCDHGA1Q9Y5H4 931 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms