RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 OLFM1Q99784 485 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 ARNT2Q9HBZ2 717 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 ZNF358Q9NW07 568 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 LRFN1Q9P244 771 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 RUVBL1Q9Y265 456 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 PLEKHA6Q9Y2H5 1048 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 HEATR5BQ9P2D3 2071 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 A0A1B0GTH9 108 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 OR2A25A4D2G3 310 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 USP27XA6NNY8 438 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 H7C0C1 242 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 PROM1O43490 865 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 KLK8O60259 260 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 NEURL1O76050 574 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 TMEM253P0C7T8 217 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 ADSLP30566 484 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 CCR7P32248 378 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 ATP5OP48047 213 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 MEOX1P50221 254 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 EFNA3P52797 238 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 DGKQP52824 942 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 NR1I3Q14994 352 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 EXT1Q16394 746 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 RNFT1Q5M7Z0 435 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 MFSD4BQ5TF39 518 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 FBXO42Q6P3S6 717 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 CPSF7Q8N684 471 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 SLC5A8Q8N695 610 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 CSNK1A1LQ8N752 337 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 MYRIPQ8NFW9 859 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 M1APQ8TC57 530 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 ASZ1Q8WWH4 475 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 RAD51AP1Q96B01 352 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 PPP1R2P1Q96PQ5 205 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 CYTH2Q99418 400 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 SMR3AQ99954 134 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 TSSK1BQ9BXA7 367 aa14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 NAT10Q9H0A0 1025 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 TP63Q9H3D4 680 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-210ENST00000503827 A0A0A6YYC8 382 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 SMTNL1A8MU46 457 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 I3L1I5 382 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 PHF2O75151 1096 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 SLC25A12O75746 678 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 APOA4P06727 396 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 CYC1P08574 325 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 MSNP26038 577 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 CMPK1P30085 196 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 SLC1A1P43005 524 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 TYRO3Q06418 890 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 SPARCL1Q14515 664 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 HKDC1Q2TB90 917 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 MINDY4Q4G0A6 757 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 ANKRD20A2Q5SQ80 823 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 ANKRD20A1Q5TYW2 823 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 ANKRD20A3Q5VUR7 823 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 LRRC8BQ6P9F7 803 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 LANCL3Q6ZV70 420 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 CAMKMTQ7Z624 323 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 CCDC71Q8IV32 467 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 OR2A1Q8NGT9 310 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 C18orf12Q96KH6 178 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 TTC1Q99614 292 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 NPAS2Q99743 824 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 DPH7Q9BTV6 452 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 VN1R1Q9GZP7 353 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 DRC3Q9H069 523 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 C10orf88Q9H8K7 445 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 HRH3Q9Y5N1 445 aa14.92□□□□□ -0.02
PDLIM7-210ENST00000503827 RTTNQ86VV8 2226 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 CDK2AP1O14519 115 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 TFECO14948 347 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 FOXS1O43638 330 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 NME2P1O60361 137 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 MAN1A2O60476 641 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 CDC40O60508 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 PRMT3O60678 531 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 GPC4O75487 556 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 SERPINC1P01008 464 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 NME2P22392 152 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 AGTR2P50052 363 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 TAS2R50P59544 299 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 MAT1AQ00266 395 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 SLC18A3Q16572 532 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 TMEM198Q66K66 360 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 ACAD11Q709F0 780 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 POGLUT1Q8NBL1 392 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 SPATA3Q8NHX4 192 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 HMGCLL1Q8TB92 370 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 SEC16BQ96JE7 1060 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 CLEC4MQ9H2X3 399 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 MMP25Q9NPA2 562 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 CAPN11Q9UMQ6 739 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 HYOU1Q9Y4L1 999 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 MRFAP1Q9Y605 127 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 ALG6Q9Y672 507 aa14.91□□□□□ -0.02
PDLIM7-210ENST00000503827 OR51F1A6NGY5 319 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 SOWAHDA6NJG2 315 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 TXNDC9O14530 226 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 SPOPO43791 374 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms