RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 C2orf54Q08AI8 447 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 CHAF1BQ13112 559 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 SLC9A5Q14940 896 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 NKG7Q16617 165 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 PHKG1Q16816 387 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 DCAF10Q5QP82 559 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 PRAMEF13Q5VWM6 474 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 AGTRAPQ6RW13 159 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 STRA8Q7Z7C7 330 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 SPNS2Q8IVW8 549 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 C17orf53Q8N3J3 647 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-232ENST00000495434 CSNK1A1LQ8N752 337 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 TEX19Q8NA77 164 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 ATL1Q8WXF7 558 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 THAP11Q96EK4 314 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 C10orf90Q96M02 699 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 SPSB2Q99619 263 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 OLFM1Q99784 485 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 MCMBPQ9BTE3 642 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 SGPP1Q9BX95 441 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 RAB17Q9H0T7 212 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 GRHL1Q9NZI5 618 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 NOVA2Q9UNW9 492 aaKnown RBP13.38□□□□□ -0.27
MRPL55-232ENST00000495434 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 NUP210LQ5VU65 1888 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 PABPN1LA6NDY0 278 aaKnown RBP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 H7BY64 318 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 AGPSO00116 658 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 HAT1O14929 419 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 MED26O95402 600 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 ZNF37AP17032 561 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 NR1D1P20393 614 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 OR1D4P47884 311 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 RPS15AP62244 130 aaKnown RBP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 TLE1Q04724 770 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 FAM53BQ14153 422 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 LCTLQ6UWM7 567 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 PPP1R32Q7Z5V6 425 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 C17orf64Q86WR6 236 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 ARHGEF39Q8N4T4 335 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 NKAPQ8N5F7 415 aaKnown RBP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 FBXL8Q96CD0 374 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 VPS39Q96JC1 886 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 VPS50Q96JG6 964 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 CABS1Q96KC9 395 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 PRAP1Q96NZ9 151 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 SMAD5Q99717 465 aaKnown RBP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 HAUS8Q9BT25 410 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 FAM129AQ9BZQ8 928 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 EPN3Q9H201 632 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 DPH5Q9H2P9 285 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 RHOJQ9H4E5 214 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 POPDC3Q9HBV1 291 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 SEMA3GQ9NS98 782 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 P4HTMQ9NXG6 502 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 ARL15Q9NXU5 204 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 C5AR2Q9P296 337 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 ZNF282Q9UDV7 671 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 RUVBL1Q9Y265 456 aaKnown RBP13.37□□□□□ -0.27
MRPL55-232ENST00000495434 PCSK5Q92824 1860 aa13.37□□□□□ -0.27
MRPL55-232ENST00000495434 TNRC6AQ8NDV7 1962 aaKnown RBP13.36□□□□□ -0.27
MRPL55-232ENST00000495434 FAM95CA0A1B0GW59 222 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 PDGFAP04085 211 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 NPPBP16860 134 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 MRPS25P82663 173 aaKnown RBP13.36□□□□□ -0.27
MRPL55-232ENST00000495434 KCNC4Q03721 635 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 OCA2Q04671 838 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 CKAP4Q07065 602 aaKnown RBP13.36□□□□□ -0.27
MRPL55-232ENST00000495434 NAE1Q13564 534 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 DSG2Q14126 1118 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 NDUFA9Q16795 377 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 CAPN13Q6MZZ7 669 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-232ENST00000495434 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 ADCK2Q7Z695 626 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 FDCSPQ8NFU4 85 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 OR56A3Q8NH54 315 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 CDKL2Q92772 493 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 COL26A1Q96A83 441 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 ATG10Q9H0Y0 220 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 SYNPO2LQ9H987 977 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 SAYSD1Q9NPB0 183 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 ABCF3Q9NUQ8 709 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 CUEDC1Q9NWM3 386 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-232ENST00000495434 GPR83Q9NYM4 423 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 CTSFQ9UBX1 484 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 MAU2Q9Y6X3 613 aa13.36□□□□□ -0.27
MRPL55-232ENST00000495434 DPM1O60762 260 aa13.35□□□□□ -0.27
MRPL55-232ENST00000495434 ZGLP1P0C6A0 271 aa13.35□□□□□ -0.27
MRPL55-232ENST00000495434 FBLP22087 321 aaKnown RBP13.35□□□□□ -0.27
MRPL55-232ENST00000495434 SLC26A3P40879 764 aa13.35□□□□□ -0.27
MRPL55-232ENST00000495434 CSNK1G2P78368 415 aa13.35□□□□□ -0.27
MRPL55-232ENST00000495434 CDKL1Q00532 357 aa13.35□□□□□ -0.27
MRPL55-232ENST00000495434 POU4F1Q01851 419 aa13.35□□□□□ -0.27
MRPL55-232ENST00000495434 AIMP2Q13155 320 aaKnown RBP13.35□□□□□ -0.27
MRPL55-232ENST00000495434 MYBPC3Q14896 1274 aa13.35□□□□□ -0.27
MRPL55-232ENST00000495434 PPP1R3AQ16821 1122 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms