RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	AASDHPPT	Q9NRN7	309 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.15	□□□□□ -1.42
FN1-223	ENST00000490833	ZSCAN32	Q9NX65	697 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	UBAP1	Q9NZ09	502 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	GDE1	Q9NZC3	331 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	ACSL5	Q9ULC5	683 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	VPS4A	Q9UN37	437 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	RNF11	Q9Y3C5	154 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	PCDHB11	Q9Y5F2	797 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	PCDHGB1	Q9Y5G3	927 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	MICAL3	Q7RTP6	2002 aa		6.15	□□□□□ -1.43
FN1-223	ENST00000490833	TANC1	Q9C0D5	1861 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SLC5A10	A0PJK1	596 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	LRRC14B	A6NHZ5	514 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833		K7ERQ8	282 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	CLIC1	O00299	241 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SOCS2	O14508	198 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ACOX3	O15254	700 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	TSPAN6	O43657	245 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	TBX19	O60806	448 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	LEFTY1	O75610	366 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	PDE9A	O76083	593 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SOX30	O94993	753 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SEMA3D	O95025	777 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	PGM3	O95394	542 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ALPL	P05186	524 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	RHO	P08100	348 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	PRSS56	P0CW18	603 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SMIM18	P0DKX4	95 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ITGAM	P11215	1152 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ADH5	P11766	374 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	COX7A2	P14406	83 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	CKMT2	P17540	419 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SYN1	P17600	705 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ITGB6	P18564	788 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	EEF1B2	P24534	225 aa	Known RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	IL12A	P29459	219 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	MAGEA2	P43356	314 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ZFP36L2	P47974	494 aa	Known RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ERF	P50548	548 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	TRA2B	P62995	288 aa	Known RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	CYP4F8	P98187	520 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	FOXK2	Q01167	660 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	RELB	Q01201	579 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	CAMK2G	Q13555	558 aa	Predicted RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ZNF77	Q15935	545 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	PHKG1	Q16816	387 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	VMAC	Q2NL98	169 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	LRRC23	Q53EV4	343 aa	Predicted RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	HMBOX1	Q6NT76	420 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	BHLHB9	Q6PI77	547 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	FBXO46	Q6PJ61	603 aa	Predicted RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	DHRS4L2	Q6PKH6	230 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	AGTRAP	Q6RW13	159 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	GCNT7	Q6ZNI0	430 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	TMEM26	Q6ZUK4	368 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	EIF3M	Q7L2H7	374 aa	Known RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	TECPR1	Q7Z6L1	1165 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ADIPOR2	Q86V24	386 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	TMEM25	Q86YD3	366 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	DEPDC4	Q8N2C3	294 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	OXR1	Q8N573	874 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	DTWD1	Q8N5C7	304 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	C11orf65	Q8NCR3	313 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	OR10A6	Q8NH74	314 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	GOT1L1	Q8NHS2	421 aa	Predicted RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SHKBP1	Q8TBC3	707 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	FRS2	Q8WU20	508 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	NR4A3	Q92570	626 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ZNF566	Q969W8	418 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	FKBP10	Q96AY3	582 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ARMC5	Q96C12	935 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	COQ8B	Q96D53	544 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	RPL10L	Q96L21	214 aa	Known RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SLC22A12	Q96S37	553 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SEPHS2	Q99611	448 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	EPYC	Q99645	322 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	DOK1	Q99704	481 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SLC29A1	Q99808	456 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	LBHD1	Q9BQE6	289 aa	Predicted RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SLC39A3	Q9BRY0	314 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	DUSP26	Q9BV47	211 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	BOC	Q9BWV1	1114 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	HDAC8	Q9BY41	377 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ACPT	Q9BZG2	426 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	GRIP2	Q9C0E4	1043 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	PAIP1	Q9H074	479 aa	Known RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	GABARAPL1	Q9H0R8	117 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	LMAN2L	Q9H0V9	348 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ZNF556	Q9HAH1	456 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	CXorf21	Q9HAI6	301 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	PIDD1	Q9HB75	910 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	PLGRKT	Q9HBL7	147 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	SGK2	Q9HBY8	427 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	POLM	Q9NP87	494 aa	Predicted RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ZDHHC4	Q9NPG8	344 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ACSS2	Q9NR19	701 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	DZANK1	Q9NVP4	752 aa		6.14	□□□□□ -1.43
FN1-223	ENST00000490833	DUS2	Q9NX74	493 aa	Known RBP	6.14	□□□□□ -1.43
FN1-223	ENST00000490833	ELOVL2	Q9NXB9	296 aa		6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms