RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 IGHV1OR21-1A0A087WYE8 117 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 IGHV5-10-1A0A0J9YXX1 117 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 CCDC189A1A4V9 331 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 A8MT66 165 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 C9orf172C9J069 976 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 UBXN8O00124 270 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 EIF3FO00303 357 aaPredicted RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 QSOX1O00391 747 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 BTN3A1O00481 513 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 NDUFAB1O14561 156 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ITM2AO43736 263 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 VEGFDO43915 354 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 KERAO60938 352 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 H2AFYO75367 372 aaKnown RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 LYPLA1O75608 230 aaPredicted RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 CDK14O94921 469 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 EML2O95834 649 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 FTH1P02794 183 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 CBSLP0DN79 551 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 LIPCP11150 499 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 MTHFD2P13995 350 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 NID1P14543 1247 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ZNF8P17098 575 aaPredicted RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 GRK2P25098 689 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ARRB2P32121 409 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 CBSP35520 551 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 GPR3P46089 330 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 SLC1A6P48664 564 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 PPM1FP49593 454 aaPredicted RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ARL4DP49703 201 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 RGS4P49798 205 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 PRKAA2P54646 552 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ABCE1P61221 599 aaKnown RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 NR1D2Q14995 579 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 TTLL9Q3SXZ7 439 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ZNF658BQ4V348 819 aaPredicted RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 PLEKHS1Q5SXH7 462 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 LIPMQ5VYY2 423 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ATG14Q6ZNE5 492 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 CHST15Q7LFX5 561 aaPredicted RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ZNF761Q86XN6 746 aaPredicted RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 GALNT13Q8IUC8 556 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 VRK3Q8IV63 474 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 STAG3L4Q8TBR4 150 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 STK35Q8TDR2 534 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ELMO1Q92556 727 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 EXT2Q93063 718 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 C7orf26Q96N11 449 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ELAC2Q9BQ52 826 aaKnown RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 CCM2Q9BSQ5 444 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 PITPNM3Q9BZ71 974 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 C20orf27Q9GZN8 174 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 NSRP1Q9H0G5 558 aaKnown RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ACSS2Q9NR19 701 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ENAMQ9NRM1 1142 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 THAP1Q9NVV9 213 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 KCNK4Q9NYG8 393 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 AKAP7Q9P0M2 348 aaPredicted RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 TMEM9Q9P0T7 183 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 ACSL6Q9UKU0 697 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 CDYLQ9Y232 598 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 GCN1Q92616 2671 aaKnown RBP7.33□□□□□ -1.24
CLDN1-202ENST00000490800 LRP4O75096 1905 aa7.33□□□□□ -1.24
CLDN1-202ENST00000490800 UNC13CQ8NB66 2214 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SLC5A10A0PJK1 596 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SYCE1LA8MT33 242 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 TMEM114B3SHH9 223 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SUPT3HB4E1H0 165 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 CHUKO15111 745 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 KPNA5O15131 536 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 KLK8O60259 260 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 NUAK1O60285 661 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SNX3O60493 162 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SNX2O60749 519 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SMIM24O75264 130 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SUPT3HO75486 399 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 GPC4O75487 556 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 IPO13O94829 963 aaKnown RBP7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SLCO2B1O94956 709 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 TPBGLP0DKB5 382 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 MPC1LP0DKB6 136 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 ENO3P13929 434 aaPredicted RBP7.32□□□□□ -1.24
CLDN1-202ENST00000490800 PLA2G2AP14555 144 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 NME2P22392 152 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 CCR10P46092 362 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 NAGLUP54802 743 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 NFKB2Q00653 900 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 HSPA14Q0VDF9 509 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 ASPHQ12797 758 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SF3A3Q12874 501 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SQSTM1Q13501 440 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 GTF2H3Q13889 308 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 LRP8Q14114 963 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 BOP1Q14137 746 aaKnown RBP7.32□□□□□ -1.24
CLDN1-202ENST00000490800 CLPPQ16740 277 aaPredicted RBP7.32□□□□□ -1.24
CLDN1-202ENST00000490800 LINC00303Q3SY05 128 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 UNC50Q53HI1 259 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 SNAP47Q5SQN1 464 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 MANEAQ5SRI9 462 aa7.32□□□□□ -1.24
CLDN1-202ENST00000490800 TMEM71Q6P5X7 295 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms