RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 SLC6A12P48065 614 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 AGTR2P50052 363 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 CCR8P51685 355 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 PRKAA2P54646 552 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 CLDN6P56747 220 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 CDC16Q13042 620 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 EIF3IQ13347 325 aaKnown RBP9.9□□□□□ -0.82
SKA1-204ENST00000488454 PCBP2Q15366 365 aaKnown RBP eCLIP9.9□□□□□ -0.82
SKA1-204ENST00000488454 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.9□□□□□ -0.82
SKA1-204ENST00000488454 FBXO48Q5FWF7 155 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 ZC3H12BQ5HYM0 836 aaKnown RBP9.9□□□□□ -0.82
SKA1-204ENST00000488454 CFAP157Q5JU67 520 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 KIAA1614Q5VZ46 1190 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 ZYG11AQ6WRX3 759 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 RAB11FIP2Q7L804 512 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 TMPRSS7Q7RTY8 843 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 B3GNT8Q7Z7M8 397 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 FAM129CQ86XR2 697 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 FAM20CQ8IXL6 584 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 KLHDC8AQ8IYD2 350 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 TMEM151AQ8N4L1 468 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 TEX9Q8N6V9 391 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 C19orf47Q8N9M1 422 aaKnown RBP9.9□□□□□ -0.82
SKA1-204ENST00000488454 UBTD2Q8WUN7 234 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 SLC5A11Q8WWX8 675 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 KLHL6Q8WZ60 621 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 ATP6V1E2Q96A05 226 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 ARL8AQ96BM9 186 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 TLCD1Q96CP7 247 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 PPM1MQ96MI6 270 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 SH3GL2Q99962 352 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 SELENOSQ9BQE4 189 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 TMEM79Q9BSE2 394 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 DPH7Q9BTV6 452 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 TWSG1Q9GZX9 223 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 KLHL25Q9H0H3 589 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 TMEM184CQ9NVA4 438 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 ZNF446Q9NWS9 450 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 GPRC5BQ9NZH0 403 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 SEMA5BQ9P283 1151 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 ANKMY1Q9P2S6 941 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 SLC17A7Q9P2U7 560 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 EMCNQ9ULC0 261 aa9.9□□□□□ -0.82
SKA1-204ENST00000488454 CCDC187A0A096LP49 1063 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 FAM149AA5PLN7 773 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 G3V2L1 256 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 H7BY64 318 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 SUPT7LO94864 414 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 SIX3O95343 332 aaPredicted RBP9.89□□□□□ -0.83
SKA1-204ENST00000488454 SBK3P0C264 359 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 JMJD7P0C870 316 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 CDH1P12830 882 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 PVRP15151 417 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 NELFEP18615 380 aaKnown RBP9.89□□□□□ -0.83
SKA1-204ENST00000488454 IMPDH1P20839 514 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 MAGP20916 626 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 CXCR2P25025 360 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 ARL1P40616 181 aaPredicted RBP9.89□□□□□ -0.83
SKA1-204ENST00000488454 LSSP48449 732 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 NAA20P61599 178 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 HERVK_113P63132 956 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 NFKB2Q00653 900 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 IRF8Q02556 426 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 ACY1Q03154 408 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 FOXM1Q08050 763 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 GTF2H2Q13888 395 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 HIST2H2ACQ16777 129 aaPredicted RBP9.89□□□□□ -0.83
SKA1-204ENST00000488454 ZXDCQ2QGD7 858 aaPredicted RBP9.89□□□□□ -0.83
SKA1-204ENST00000488454 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 HHATQ5VTY9 493 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 HIST2H2AA3Q6FI13 130 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 GTF2H2CQ6P1K8 395 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 FOXR1Q6PIV2 292 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 CCNYL1Q8N7R7 359 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 ANKRD42Q8N9B4 389 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 PPP1R14CQ8TAE6 165 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 FLVCR1-AS1Q8TAF5 88 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 RNF217Q8TC41 542 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 LIN37Q96GY3 246 aaPredicted RBP9.89□□□□□ -0.83
SKA1-204ENST00000488454 SLC41A2Q96JW4 573 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 PRAP1Q96NZ9 151 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 OR4K3Q96R72 315 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 PAIP2Q9BPZ3 127 aaKnown RBP9.89□□□□□ -0.83
SKA1-204ENST00000488454 PLCD4Q9BRC7 762 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 ERVK-6Q9BXR3 956 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 C12orf65Q9H3J6 166 aaKnown RBP9.89□□□□□ -0.83
SKA1-204ENST00000488454 FANCEQ9HB96 536 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 COPG2Q9UBF2 871 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 KLHL20Q9Y2M5 609 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 LOXL2Q9Y4K0 774 aa9.89□□□□□ -0.83
SKA1-204ENST00000488454 ASXL3Q9C0F0 2248 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 TMEM120BA0PK00 339 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 EFCAB7A8K855 629 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 HYAL3O43820 417 aaPredicted RBP9.88□□□□□ -0.83
SKA1-204ENST00000488454 TRIM13O60858 407 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 C1GALT1C1LP0DN25 315 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 HPDP32754 393 aaPredicted RBP9.88□□□□□ -0.83
SKA1-204ENST00000488454 SLC18A1P54219 525 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 NAGLUP54802 743 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 DNAJB13P59910 316 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms