RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 SLC25A23Q9BV35 468 aa3.47□□□□□ -1.85
TTC3-220ENST00000487711 GTPBP2Q9BX10 602 aaKnown RBP3.47□□□□□ -1.85
TTC3-220ENST00000487711 UPF3AQ9H1J1 476 aaKnown RBP3.47□□□□□ -1.85
TTC3-220ENST00000487711 CCDC177Q9NQR7 707 aaPredicted RBP3.47□□□□□ -1.85
TTC3-220ENST00000487711 POLLQ9UGP5 575 aa3.47□□□□□ -1.85
TTC3-220ENST00000487711 CCL27Q9Y4X3 112 aa3.47□□□□□ -1.85
TTC3-220ENST00000487711 IGSF1Q8N6C5 1336 aa3.46□□□□□ -1.85
TTC3-220ENST00000487711 TRBV5-5A0A0J9YX44 114 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 KRTAP16-1A8MUX0 517 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 KPNA7A9QM74 516 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 H0YAE9 185 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 IGHEP01854 428 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 ZSCAN5DPP0CG00 497 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 PRKACGP22612 351 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 CETN2P41208 172 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 XGP55808 180 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 CLDN15P56746 228 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 CYCSP99999 105 aaKnown RBP3.46□□□□□ -1.86
TTC3-220ENST00000487711 SGCGQ13326 291 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 TRIM29Q14134 588 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 NECTIN1Q15223 517 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 C1orf141Q5JVX7 400 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 ENPP7Q6UWV6 458 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 METTL7BQ6UX53 244 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 PPP1R21Q6ZMI0 780 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 LEKR1Q6ZMV7 388 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 PIK3R3Q92569 461 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 ATOH8Q96SQ7 321 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 RBM4BQ9BQ04 359 aaKnown RBP3.46□□□□□ -1.86
TTC3-220ENST00000487711 CDK19Q9BWU1 502 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 UBXN6Q9BZV1 441 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 OR10A4Q9H209 315 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 FZD8Q9H461 694 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 FN3KQ9H479 309 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 NFKBIL1Q9UBC1 381 aaPredicted RBP3.46□□□□□ -1.86
TTC3-220ENST00000487711 CSNK1G3Q9Y6M4 447 aa3.46□□□□□ -1.86
TTC3-220ENST00000487711 A0A087WUV0 522 aaPredicted RBP3.45□□□□□ -1.86
TTC3-220ENST00000487711 E9PQ18 207 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 CCL24O00175 119 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 KRT33AO76009 404 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 PENKP01210 267 aaPredicted RBP3.45□□□□□ -1.86
TTC3-220ENST00000487711 ACAT1P24752 427 aaKnown RBP3.45□□□□□ -1.86
TTC3-220ENST00000487711 HLA-FP30511 346 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 ALDH1B1P30837 517 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 HNF4AP41235 474 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 TAF6P49848 677 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 CSNK2BP67870 215 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 CDH18Q13634 790 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 TMEM132DQ14C87 1099 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 PTPN14Q15678 1187 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 HYAL4Q2M3T9 481 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 LACTB2Q53H82 288 aaPredicted RBP3.45□□□□□ -1.86
TTC3-220ENST00000487711 DOK6Q6PKX4 331 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 IL17RELQ6ZVW7 336 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 FCRLAQ7L513 359 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 CCDC186Q7Z3E2 898 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 ADCK2Q7Z695 626 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 GTSCR1Q86UQ5 136 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 PGM2Q96G03 612 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 RMDN2Q96LZ7 410 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 SPATA33Q96N06 139 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 FAM129AQ9BZQ8 928 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 WWTR1Q9GZV5 400 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 SNX25Q9H3E2 840 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 ST6GALNAC4Q9H4F1 302 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 TEX10Q9NXF1 929 aaPredicted RBP3.45□□□□□ -1.86
TTC3-220ENST00000487711 PAK5Q9P286 719 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 CFDP1Q9UEE9 299 aaPredicted RBP3.45□□□□□ -1.86
TTC3-220ENST00000487711 LIPGQ9Y5X9 500 aa3.45□□□□□ -1.86
TTC3-220ENST00000487711 IGKV3D-20A0A0C4DH25 116 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 TRBV4-1A0A0J9YWV2 114 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 C2CD4DB7Z1M9 353 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 CRLF1O75462 422 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 SERPING1P05155 500 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 STAG3L1P0CL83 205 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 FDPSP14324 419 aaKnown RBP3.44□□□□□ -1.86
TTC3-220ENST00000487711 UGT1A4P22310 534 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 SOX3P41225 446 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 RAD23AP54725 363 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 MTCP1P56278 107 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 IRX6P78412 446 aaPredicted RBP3.44□□□□□ -1.86
TTC3-220ENST00000487711 MTF1Q14872 753 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 LPAL2Q16609 132 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 PTGISQ16647 500 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 C2CD6Q53TS8 623 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 CES4AQ5XG92 561 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 NOTUMQ6P988 496 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 SLC24A5Q71RS6 500 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 ERN2Q76MJ5 926 aaKnown RBP3.44□□□□□ -1.86
TTC3-220ENST00000487711 CHMP1BQ7LBR1 199 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 FAM89BQ8N5H3 189 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 IQUBQ8NA54 791 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 NUP37Q8NFH4 326 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 TAF15Q92804 592 aaKnown RBP eCLIP3.44□□□□□ -1.86
TTC3-220ENST00000487711 BTBD9Q96Q07 612 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 EGFL8Q99944 293 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 PKP2Q99959 881 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 KATNB1Q9BVA0 655 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 SDCBP2Q9H190 292 aa3.44□□□□□ -1.86
TTC3-220ENST00000487711 ACTL8Q9H568 366 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms