RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 H7C417 338 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 HSPA12AO43301 675 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 ARL6IP5O75915 188 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 UBXN7O94888 489 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 HLA-DPB1P04440 258 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 IL3P08700 152 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 RPIAP49247 311 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 GBE1Q04446 702 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 GRIK5Q16478 980 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 MEP1AQ16819 746 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 MSANTD2Q6P1R3 559 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 CPNE2Q96FN4 548 aaPredicted RBP8.55□□□□□ -1.04
GABRE-209ENST00000486255 IL4I1Q96RQ9 567 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 MAPKAP1Q9BPZ7 522 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 PDCD2LQ9BRP1 358 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 GLS2Q9UI32 602 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 PPM1HQ9ULR3 514 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 SLC35F4A4IF30 521 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 IQCF5A8MTL0 148 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 PDYNP01213 254 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 HCKP08631 526 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 PCSK2P16519 638 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 HSD17B2P37059 387 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 CRISP3P54108 245 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 BACE1P56817 501 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 ZNF460Q14592 562 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 XKR5Q6UX68 686 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 SLC36A4Q6YBV0 504 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 NXPE1Q8N323 547 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 OR7G2Q8NG99 324 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 ZNF420Q8TAQ5 688 aaPredicted RBP8.55□□□□□ -1.04
GABRE-209ENST00000486255 GEMIN6Q8WXD5 167 aaKnown RBP8.55□□□□□ -1.04
GABRE-209ENST00000486255 AURKBQ96GD4 344 aaPredicted RBP8.55□□□□□ -1.04
GABRE-209ENST00000486255 CAMK1GQ96NX5 476 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 PCDHB18PQ96TA0 734 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 DUSP26Q9BV47 211 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 FAM198AQ9UFP1 575 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 PCDHGA11Q9Y5H2 935 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 GRIN2DO15399 1336 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 NUP98P52948 1817 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 SMIM30A4D0T7 59 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 TSTD3H0UI37 97 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 CLDN5O00501 218 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 ITGA5P08648 1049 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 MATN1P21941 496 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 SLC6A9P48067 706 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 CD97P48960 835 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 NCBP2P52298 156 aaKnown RBP eCLIP8.55□□□□□ -1.042e-8■■□□□ 12.6
GABRE-209ENST00000486255 TAS2R43P59537 309 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 PUS10Q3MIT2 529 aaKnown RBP8.55□□□□□ -1.04
GABRE-209ENST00000486255 FIP1L1Q6UN15 594 aaKnown RBP8.55□□□□□ -1.04
GABRE-209ENST00000486255 BANPQ8N9N5 519 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 CD99L2Q8TCZ2 262 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 SMARCD2Q92925 531 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 LRRC58Q96CX6 371 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 PORCNQ9H237 461 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 ZNF510Q9Y2H8 683 aa8.55□□□□□ -1.04
GABRE-209ENST00000486255 EXOSC1Q9Y3B2 195 aaKnown RBP8.55□□□□□ -1.04
GABRE-209ENST00000486255 PCYT1BQ9Y5K3 369 aaPredicted RBP8.55□□□□□ -1.04
GABRE-209ENST00000486255 LRRC72A6NJI9 287 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 CLDN4O14493 209 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 MFSD11O43934 449 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 PAGE1O75459 146 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 GOT2P00505 430 aaKnown RBP8.54□□□□□ -1.04
GABRE-209ENST00000486255 MAPK3P27361 379 aaPredicted RBP8.54□□□□□ -1.04
GABRE-209ENST00000486255 NMBRP28336 390 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 DSC3Q14574 896 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 CTC1Q2NKJ3 1217 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 ZNF367Q7RTV3 350 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 METTL21AQ8WXB1 218 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 OR14A2Q96R54 314 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 MMP27Q9H306 513 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 NANSQ9NR45 359 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 CHRAC1Q9NRG0 131 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 A0A0G2JMP0 313 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 HTR1AP08908 422 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 GTF2F2P13984 249 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 ADH6P28332 368 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 ENTPD1P49961 510 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 TMBIM6P55061 237 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 FXYD6P3P58550 94 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 RPS3AP61247 264 aaKnown RBP8.54□□□□□ -1.04
GABRE-209ENST00000486255 CHIT1Q13231 466 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 SLC25A52Q3SY17 297 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 IRF2BP2Q7Z5L9 587 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 LDB1Q86U70 411 aaPredicted RBP8.54□□□□□ -1.04
GABRE-209ENST00000486255 SLC15A3Q8IY34 581 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 NAT16Q8N8M0 369 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 MFSD2AQ8NA29 543 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 OR4M2Q8NGB6 313 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 SHKBP1Q8TBC3 707 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 PTPN18Q99952 460 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 OR10A4Q9H209 315 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 AMBNQ9NP70 447 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 KIAA1522Q9P206 1035 aaPredicted RBP8.54□□□□□ -1.04
GABRE-209ENST00000486255 FZD4Q9ULV1 537 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 AP1M2Q9Y6Q5 423 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 EEF1E1O43324 174 aaKnown RBP8.54□□□□□ -1.04
GABRE-209ENST00000486255 B3GALT2O43825 422 aa8.54□□□□□ -1.04
GABRE-209ENST00000486255 AP2A1O95782 977 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms