RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CEPT1Q9Y6K0 416 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 WDFY4Q6ZS81 3184 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 DCHS1Q96JQ0 3298 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 KIAA1549LQ6ZVL6 1849 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 MYOFQ9NZM1 2061 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 GLYATL1P3A0A0U1RQE8 302 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TRIM64A6NGJ6 449 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 GRXCR1A8MXD5 290 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 H0Y858 1186 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 H0YAE9 185 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 K7EPI3 171 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF701M0R085 212 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 AGRPO00253 132 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 PLOD2O00469 737 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 DLGAP1O14490 977 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TNFRSF10CO14798 259 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CLGNO14967 610 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ANKRD28O15084 1053 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 LSM1O15116 133 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ACOX3O15254 700 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CLOCKO15516 846 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TAPBPO15533 448 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TPST1O60507 370 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SLC25A14O95258 325 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 KCNH1O95259 989 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 PRAMEF1O95521 474 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 OLFM2O95897 454 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 HPRP00739 348 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TRBC1P01850 177 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 EBLN1P0CF75 366 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 RAP2AP10114 183 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 G6PDP11413 515 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CTPS1P17812 591 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 RPL17P18621 184 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CDH2P19022 906 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 PI3P19957 117 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 POU3F3P20264 500 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 HRH2P25021 359 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ACRV1P26436 265 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 IL12AP29459 219 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 OXTRP30559 389 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 AKT1P31749 480 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SPAM1P38567 509 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CAPGP40121 348 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ARL1P40616 181 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CASP2P42575 452 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 RPS9P46781 194 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 HTR6P50406 440 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 AFF3P51826 1226 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 EPHB3P54753 998 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CHRNB3Q05901 458 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 EGR3Q06889 387 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CDH18Q13634 790 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 NKG7Q16617 165 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TCTN1Q2MV58 587 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 AP5B1Q2VPB7 878 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SLC36A3Q495N2 470 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 FUT11Q495W5 492 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TRIM60Q495X7 471 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 FAM98BQ52LJ0 330 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 FBXO48Q5FWF7 155 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 RABL3Q5HYI8 236 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ATXN7L2Q5T6C5 722 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CACHD1Q5VU97 1274 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 GLYATQ6IB77 296 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TTC33Q6PID6 262 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SLC2A7Q6PXP3 512 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SCIMPQ6UWF3 145 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ABRAXAS1Q6UWZ7 409 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 FAM151BQ6UXP7 276 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 LINGO4Q6UY18 593 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 DLEU7Q6UYE1 221 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 MACC1Q6ZN28 852 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 LPCAT2Q7L5N7 544 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 GPR141Q7Z602 305 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 DNAJB7Q7Z6W7 309 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 PATL1Q86TB9 770 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ITIH5Q86UX2 942 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 IFNEQ86WN2 208 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ERI1Q8IV48 349 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 RIMKLAQ8IXN7 391 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 KIAA2013Q8IYS2 634 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TCAIMQ8N3R3 496 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SYNPOQ8N3V7 929 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CPXM2Q8N436 756 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 PAF1Q8N7H5 531 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 OR52B6Q8NGF0 335 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 OR52E4Q8NGH9 312 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 DNAJB8Q8NHS0 232 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 PNPT1Q8TCS8 783 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 BPIFB1Q8TDL5 484 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ADAMTS16Q8TE57 1224 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 WBP2Q969T9 261 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ESAMQ96AP7 390 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ULK4Q96C45 1275 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 BIRC7Q96CA5 298 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ALG14Q96F25 216 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TEX37Q96LM6 180 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 MAGEB10Q96LZ2 347 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 RDH12Q96NR8 316 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms