RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ASZ1Q8WWH4 475 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 MOCOSQ96EN8 888 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 CDKN2AIPNLQ96HQ2 116 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 FOPNLQ96NB1 174 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 AGAP4Q96P64 663 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 APOL2Q9BQE5 337 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 FAM96AQ9H5X1 160 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 WDR54Q9H977 334 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 P4HTMQ9NXG6 502 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 UTP6Q9NYH9 597 aaKnown RBP6.98□□□□□ -1.29
BRCA1-214ENST00000477152 SLC39A10Q9ULF5 831 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 FAM169AQ9Y6X4 670 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 NUP210LQ5VU65 1888 aa6.98□□□□□ -1.29
BRCA1-214ENST00000477152 HEATR9A2RTY3 570 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 MIF4GDA9UHW6 222 aaKnown RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 E7EVH7 732 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PCDH17O14917 1159 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PRPF4O43172 522 aaKnown RBP eCLIP6.97□□□□□ -1.295e-17■■■■■ 29.7
BRCA1-214ENST00000477152 GPR39O43194 453 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 DNAJC8O75937 253 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 SCG5P05408 212 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 APOA4P06727 396 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 ITGA3P26006 1051 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 MSNP26038 577 aaKnown RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 STIP1P31948 543 aaKnown RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PTPRCAPQ14761 206 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 B3GNTL1Q67FW5 361 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 FBXO38Q6PIJ6 1188 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 AFTPHQ6ULP2 937 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PPP1R21Q6ZMI0 780 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 THNSL2Q86YJ6 484 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 CCDC110Q8TBZ0 833 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PPP4R1Q8TF05 950 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 MFSD3Q96ES6 412 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 GBP5Q96PP8 586 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PANX3Q96QZ0 392 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 WDR77Q9BQA1 342 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 FRMD8P1Q9BZ68 369 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 TRIM5Q9C035 493 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 CDC23Q9UJX2 597 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 AMFRQ9UKV5 643 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 A0A1B0GUH1 482 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 A0A1B0GX78 115 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 TMEM82A0PJX8 343 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 BTNL10A8MVZ5 291 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 SGTAO43765 313 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 DYRK3O43781 588 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 CAPN1P07384 714 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 UQCRHP07919 91 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 H2AFB1P0C5Y9 115 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 H2AFB2P0C5Z0 115 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 MMP11P24347 488 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 FDFT1P37268 417 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 RAB28P51157 221 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PRAMEP78395 509 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 OCA2Q04671 838 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 MAP4K2Q12851 820 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 CDH17Q12864 832 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 RBBP7Q16576 425 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 FASTKD1Q53R41 847 aaKnown RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 ZNF789Q5FWF6 425 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 C1orf189Q5VU69 101 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 UNC5DQ6UXZ4 953 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 DCUN1D3Q8IWE4 304 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PPIL6Q8IXY8 311 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 CISD2Q8N5K1 135 aaKnown RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 ST6GALNAC3Q8NDV1 305 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 KRT35Q92764 455 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PEX13Q92968 403 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 ZUFSPQ96AP4 578 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 SNRNP40Q96DI7 357 aaKnown RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 DNAJC1Q96KC8 554 aaKnown RBP6.97□□□□□ -1.29
BRCA1-214ENST00000477152 OR2A14Q96R47 310 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 CDADC1Q9BWV3 514 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 XKR8Q9H6D3 395 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 DUSP13Q9UII6 198 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 RIMKLBQ9ULI2 386 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 CDC14AQ9UNH5 594 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 ICKQ9UPZ9 632 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 PCDHA9Q9Y5H5 950 aa6.97□□□□□ -1.29
BRCA1-214ENST00000477152 MED13Q9UHV7 2174 aa6.96□□□□□ -1.29
BRCA1-214ENST00000477152 SHANK1Q9Y566 2161 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 TARM1B6A8C7 271 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 DSCR3O14972 297 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 SRPX2O60687 465 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-214ENST00000477152 SEMA7AO75326 666 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 KLF7O75840 302 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-214ENST00000477152 CBX6O95503 412 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 CBSLP0DN79 551 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 PVRP15151 417 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 FDXRP22570 491 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 PDHA2P29803 388 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 CBSP35520 551 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 MRPL49Q13405 166 aaKnown RBP6.96□□□□□ -1.3
BRCA1-214ENST00000477152 POU6F1Q14863 301 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 TUBB8Q3ZCM7 444 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 PLEKHN1Q494U1 663 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-214ENST00000477152 PRAMEF17Q5VTA0 474 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 LCN10Q6JVE6 187 aa6.96□□□□□ -1.3
BRCA1-214ENST00000477152 FAM180AQ6UWF9 173 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms