RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 F5H6K3 240 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 CTDNEP1O95476 244 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 PDHBP11177 359 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 GJB2P29033 226 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 CEACAM8P31997 349 aaPredicted RBP4.9□□□□□ -1.63
CCDC39-202ENST00000471307 NUCB2P80303 420 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 AKAP17AQ02040 695 aaKnown RBP4.9□□□□□ -1.63
CCDC39-202ENST00000471307 PPARDQ03181 441 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 KLRC3Q07444 240 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 ADAMTSL4-AS1Q5T5F5 129 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 ITPRIPL1Q6GPH6 555 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 GTSCR1Q86UQ5 136 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 FAM184AQ8NB25 1140 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 PPFIBP2Q8ND30 876 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 USP6NLQ92738 828 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 TMEM143Q96AN5 459 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 ANKRD9Q96BM1 317 aaPredicted RBP4.9□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF689Q96CS4 500 aaPredicted RBP4.9□□□□□ -1.63
CCDC39-202ENST00000471307 NUDT16L1Q9BRJ7 211 aaKnown RBP4.9□□□□□ -1.63
CCDC39-202ENST00000471307 TRIM51Q9BSJ1 452 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 ITPAQ9BY32 194 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 SLA2Q9H6Q3 261 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 HHATLQ9HCP6 504 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 MBNL1Q9NR56 388 aaKnown RBP4.9□□□□□ -1.63
CCDC39-202ENST00000471307 CHMP5Q9NZZ3 219 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 MAD2L2Q9UI95 211 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 NOL7Q9UMY1 257 aaKnown RBP4.9□□□□□ -1.63
CCDC39-202ENST00000471307 PYGO1Q9Y3Y4 419 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 BAZ2BQ9UIF8 2168 aaKnown RBP4.89□□□□□ -1.63
CCDC39-202ENST00000471307 A0A087WW49 117 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 IGLV9-49A0A0B4J1Y8 123 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 A0A0J9YWU9 116 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 CXCL11O14625 94 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 TPPPO94811 219 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 AP2A2O94973 939 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 DEXIO95424 95 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 CD4P01730 458 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 HMBSP08397 361 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 FRMD6-AS1P0C7T7 363 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 ACADMP11310 421 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 FDPSP14324 419 aaKnown RBP4.89□□□□□ -1.63
CCDC39-202ENST00000471307 CEBPBP17676 345 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 GABRB1P18505 474 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 TYMPP19971 482 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 SLC1A4P43007 532 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 CDH8P55286 799 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 BACE1P56817 501 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 SNRPEP62304 92 aaKnown RBP4.89□□□□□ -1.63
CCDC39-202ENST00000471307 TEAD2Q15562 447 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 SHROOM1Q2M3G4 852 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF554Q86TJ5 538 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 ERO1BQ86YB8 467 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 LYG1Q8N1E2 194 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 ACER1Q8TDN7 264 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 CHURC1Q8WUH1 139 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 DAZLQ92904 295 aaKnown RBP4.89□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF582Q96NG8 517 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-202ENST00000471307 PYGO2Q9BRQ0 406 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 SPZ1Q9BXG8 430 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 VCPKMTQ9H867 229 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 PELI2Q9HAT8 420 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 TMEM181Q9P2C4 612 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 ZHX2Q9Y6X8 837 aa4.89□□□□□ -1.63
CCDC39-202ENST00000471307 ATAD5Q96QE3 1844 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 SSC5DA1L4H1 1573 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 MYH6P13533 1939 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 A0A1W2PN81 502 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 H3BQV1 296 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 WDR46O15213 610 aaKnown RBP4.88□□□□□ -1.63
CCDC39-202ENST00000471307 DCXO43602 365 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 STX6O43752 255 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 JAK2O60674 1132 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 PLEKHA8P1O95397 391 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 NDUFB10O96000 172 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 RB1P06400 928 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 GOLGA8HP0CJ92 632 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 CAPN3P20807 821 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 SYT1P21579 422 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 NMBRP28336 390 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 CHRNA7P36544 502 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 PSMC4P43686 418 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 LGALS3BPQ08380 585 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 SPP2Q13103 211 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 PRKAA1Q13131 559 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 AIMP2Q13155 320 aaKnown RBP4.88□□□□□ -1.63
CCDC39-202ENST00000471307 TRIM29Q14134 588 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 VGLL4Q14135 290 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 LPAL2Q16609 132 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 ARHGEF16Q5VV41 709 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 SPATA1Q5VX52 437 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 HAUS3Q68CZ6 603 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 KIAA0930Q6ICG6 404 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-202ENST00000471307 METTL7BQ6UX53 244 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 CHST9Q7L1S5 443 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 SPEM1Q8N4L4 309 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 CPSF7Q8N684 471 aaKnown RBP4.88□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF713Q8N859 430 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-202ENST00000471307 MTERF3Q96E29 417 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms