RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 H3BQ06 376 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 J3KRW8 73 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PSMD9O00233 223 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SDHDO14521 159 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 NEMP1O14524 444 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 TOR1BO14657 336 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PRMT5O14744 637 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 BCKDKO14874 412 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 KIAA0355O15063 1070 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ARPC2O15144 300 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 INPP4BO15327 924 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PSMD3O43242 534 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 MED7O43513 233 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SCN2BO60939 215 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CILPO75339 1184 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ENTPD3O75355 529 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CRTAPO75718 401 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ENDOD1O94919 500 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 WDR47O94967 919 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 DHFRP00374 187 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 HLA-DQB1P01920 261 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CYP3A4P08684 503 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 LTA4HP09960 611 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CSH1P0DML2 217 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CSH2P0DML3 217 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SNHG28P0DPA3 235 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ETS1P14921 441 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 BPIP17213 487 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ATP6V1B2P21281 511 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 LTKP29376 864 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ASMTP46597 345 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 GCLMP48507 274 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 NRIP1P48552 1158 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RORCP51449 518 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CLCN5P51795 746 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 TKTL1P51854 596 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ATXN3P54252 364 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PRMT2P55345 433 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RAG2P55895 527 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ITGA1P56199 1179 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CD81P60033 236 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 GTF2BQ00403 316 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CD83Q01151 205 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CD47Q08722 323 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 LRRC74AQ0VAA2 488 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 GTF2H3Q13889 308 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PRPSAP1Q14558 356 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PON2Q15165 354 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 GPR19Q15760 415 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 GPR162Q16538 588 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 FSCN1Q16658 493 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 FAM214AQ32MH5 1076 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 UGT3A2Q3SY77 523 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CDNFQ49AH0 187 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ANKRD39Q53RE8 183 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ARL13AQ5H913 290 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 FAM209BQ5JX69 171 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 DGKKQ5KSL6 1271 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 TMEM240Q5SV17 173 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CATSPEREQ5SY80 951 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PDZK1Q5T2W1 519 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 LCN1P1Q5VSP4 162 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 YOD1Q5VVQ6 348 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 KANK2Q63ZY3 851 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 KDM4DQ6B0I6 523 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CAPN13Q6MZZ7 669 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 LILRA6Q6PI73 481 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 VHLLQ6RSH7 139 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 KCNT2Q6UVM3 1135 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CYP2R1Q6VVX0 501 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 UTS2BQ765I0 119 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 EIF3MQ7L2H7 374 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RAB11FIP2Q7L804 512 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF367Q7RTV3 350 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SPATA19Q7Z5L4 167 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 DDX53Q86TM3 631 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RFX6Q8HWS3 928 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 SPPL2CQ8IUH8 684 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 IGDCC3Q8IVU1 814 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 RIMKLAQ8IXN7 391 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ZZZ3Q8IYH5 903 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 FAM9CQ8IZT9 166 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 MIER2Q8N344 545 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 CPA6Q8N4T0 437 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PCDH20Q8N6Y1 951 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PLD5Q8N7P1 536 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF366Q8N895 744 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 DNAAF3Q8N9W5 541 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 C19orf18Q8NEA5 215 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 OR1M1Q8NGA1 313 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ITFG1Q8TB96 612 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 NSUN6Q8TEA1 469 aaKnown RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF431Q8TF32 576 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 BTN2A2Q8WVV5 523 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 ATOH1Q92858 354 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-207ENST00000468925 USP7Q93009 1102 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 HGDQ93099 445 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 UBE2FQ969M7 185 aa4.72□□□□□ -1.65
SF3B1-207ENST00000468925 FBXW5Q969U6 566 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms