RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 GPR78Q96P69 363 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 OR52B2Q96RD2 323 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 CCM2Q9BSQ5 444 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 BDH2Q9BUT1 245 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 BOCQ9BWV1 1114 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
PMF1-204ENST00000466489 PALMDQ9NP74 551 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 CCM2LQ9NUG4 571 aaPredicted RBP9.72□□□□□ -0.85
PMF1-204ENST00000466489 TMEM9Q9P0T7 183 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 TMEM181Q9P2C4 612 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 ZDHHC2Q9UIJ5 367 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 RIMS3Q9UJD0 308 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 BLOC1S6Q9UL45 172 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 ACSL5Q9ULC5 683 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 PNMA8BQ9ULN7 279 aaPredicted RBP9.72□□□□□ -0.85
PMF1-204ENST00000466489 KCNK6Q9Y257 313 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 BTBD3Q9Y2F9 522 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 PRKAB1Q9Y478 270 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 COPG1Q9Y678 874 aaKnown RBP9.72□□□□□ -0.85
PMF1-204ENST00000466489 AP4B1Q9Y6B7 739 aa9.72□□□□□ -0.85
PMF1-204ENST00000466489 C17orf113A0A1B0GUU1 675 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 RHPN2P1A8MT19 583 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 E5RI56 91 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 H0YAE9 185 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 GOLGA8TH3BQL2 631 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 STX16-NPEPL1H3BU86 382 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 STX16O14662 325 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 MRASO14807 208 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 CBFA2T3O75081 653 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 KCNK5O95279 499 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 ESR1P03372 595 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 GP1BAP07359 652 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 CKMT1AP12532 417 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 F3P13726 295 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 LBPP18428 481 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 PPM1FP49593 454 aaPredicted RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 CDKN1CP49918 316 aaPredicted RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 CDK9P50750 372 aaKnown RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 CTSCP53634 463 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 PKNOX1P55347 436 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 EEFSECP57772 596 aaKnown RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 E2F1Q01094 437 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 DLG1Q12959 904 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 LCP2Q13094 533 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 RPA4Q13156 261 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 MAD2L1Q13257 205 aaPredicted RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 TUBA3CQ13748 450 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 TYSND1Q2T9J0 566 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 C14orf28Q4W4Y0 310 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 DGLUCYQ7Z3D6 616 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 SLC9B2Q86UD5 537 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 CUZD1Q86UP6 607 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 KBTBD2Q8IY47 623 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 DRAXINQ8NBI3 349 aaPredicted RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 PDPRQ8NCN5 879 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 OR2L2Q8NH16 312 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 FBXO27Q8NI29 283 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 WDR48Q8TAF3 677 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 BAHD1Q8TBE0 780 aaPredicted RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 C19orf60Q96EN9 201 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 MAGED4Q96JG8 741 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 CAMK1GQ96NX5 476 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 ABCG4Q9H172 646 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 DDX18Q9NVP1 670 aaKnown RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 TBCCD1Q9NVR7 557 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 TAS2R13Q9NYV9 303 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 ACTR3BQ9P1U1 418 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 FAM8A1Q9UBU6 413 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 RSL24D1Q9UHA3 163 aaKnown RBP9.71□□□□□ -0.86
PMF1-204ENST00000466489 PCDHGA1Q9Y5H4 931 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 HEBP2Q9Y5Z4 205 aa9.71□□□□□ -0.86
PMF1-204ENST00000466489 SPTBN4Q9H254 2564 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 DCDC2BA2VCK2 349 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 CPED1A4D0V7 1026 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 CCDC160A6NGH7 325 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 SDHDO14521 159 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 TM4SF5O14894 197 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 AZIN1O14977 448 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 NUDT21O43809 227 aaKnown RBP9.7□□□□□ -0.86
PMF1-204ENST00000466489 KDM1AO60341 852 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 TRMUO75648 421 aaKnown RBP9.7□□□□□ -0.86
PMF1-204ENST00000466489 RFPL3O75679 317 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 TRIM16O95361 564 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 FUCA1P04066 466 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 RPN2P04844 631 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 CELA2BP08218 269 aaPredicted RBP9.7□□□□□ -0.86
PMF1-204ENST00000466489 PRSS56P0CW18 603 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 GLB1P16278 677 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 RPS3P23396 243 aaKnown RBP eCLIP9.7□□□□□ -0.86
PMF1-204ENST00000466489 ACP1P24666 158 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 MPSTP25325 297 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 ARNTP27540 789 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 ADARP55265 1226 aaKnown RBP9.7□□□□□ -0.86
PMF1-204ENST00000466489 KCNK10P57789 538 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 TAS2R39P59534 338 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 B4GALNT1Q00973 533 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 BOP1Q14137 746 aaKnown RBP9.7□□□□□ -0.86
PMF1-204ENST00000466489 SPIDRQ14159 915 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 KRT33BQ14525 404 aa9.7□□□□□ -0.86
PMF1-204ENST00000466489 TLR1Q15399 786 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms