RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 GFERP55789 205 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 ABATP80404 500 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 MC1RQ01726 317 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 SRSF1Q07955 248 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■■■■□ 23.2
CPSF4-209ENST00000465132 DLG1Q12959 904 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 GRB7Q14451 532 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 PHKG1Q16816 387 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 TECRLQ5HYJ1 363 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 THEMIS2Q5TEJ8 643 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 AGTRAPQ6RW13 159 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 HOMEZQ8IX15 550 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 C4orf33Q8N1A6 199 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 ESX1Q8N693 406 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 BANPQ8N9N5 519 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 PDPRQ8NCN5 879 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 APOBEC4Q8WW27 367 aaKnown RBP16.79■□□□□ 0.28
CPSF4-209ENST00000465132 STARD8Q92502 1023 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 GPR78Q96P69 363 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 ATOH8Q96SQ7 321 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 ZNF71Q9NQZ8 489 aaPredicted RBP16.79■□□□□ 0.28
CPSF4-209ENST00000465132 WWOXQ9NZC7 414 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 OGFRQ9NZT2 677 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 STOX2Q9P2F5 926 aaPredicted RBP16.79■□□□□ 0.28
CPSF4-209ENST00000465132 ANAPC2Q9UJX6 822 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 PCM1Q15154 2024 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 ISM1B1AKI9 464 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 TM9SF1O15321 606 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 ZWINTO95229 277 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 C9P02748 559 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 TYRP1P17643 537 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 CMPK1P30085 196 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 MAP7Q14244 749 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 OR4D1Q15615 310 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 SLC5A12Q1EHB4 618 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 DEFB109BQ30KR1 87 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 CRTC2Q53ET0 693 aaPredicted RBP16.78■□□□□ 0.28
CPSF4-209ENST00000465132 TNFAIP8L3Q5GJ75 292 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 IRGCQ6NXR0 463 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 SH2D5Q6ZV89 423 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 KMT5CQ86Y97 462 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 ZNF480Q8WV37 535 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 PTERQ96BW5 349 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 XPR1Q9UBH6 696 aa16.78■□□□□ 0.28
CPSF4-209ENST00000465132 TLCD2A6NGC4 264 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 E7ENX8 843 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 STK16O75716 305 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 MYL2P10916 166 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 POLR2CP19387 275 aaPredicted RBP16.77■□□□□ 0.28
CPSF4-209ENST00000465132 TCN2P20062 427 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 ATP5F1P24539 256 aaPredicted RBP16.77■□□□□ 0.28
CPSF4-209ENST00000465132 IMPA1P29218 277 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 GGT5P36269 586 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 ARL4DP49703 201 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 FOXK1P85037 733 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 TAP2Q03519 686 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 FOXM1Q08050 763 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 TSTA3Q13630 321 aaPredicted RBP16.77■□□□□ 0.28
CPSF4-209ENST00000465132 SF1Q15637 639 aaKnown RBP16.77■□□□□ 0.28
CPSF4-209ENST00000465132 ATP1A1-AS1Q5TC04 95 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 EXOC3L1Q86VI1 746 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 ADGRF3Q8IZF5 1079 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 PLD6Q8N2A8 252 aaKnown RBP16.77■□□□□ 0.28
CPSF4-209ENST00000465132 TBC1D19Q8N5T2 526 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 DLG3Q92796 817 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 EXT2Q93063 718 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 RHBDF1Q96CC6 855 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 ABHD17AQ96GS6 310 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 ATP6V1G3Q96LB4 118 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 UNKQ9C0B0 810 aaKnown RBP16.77■□□□□ 0.28
CPSF4-209ENST00000465132 XKR8Q9H6D3 395 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 C1GALT1Q9NS00 363 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 ACTR10Q9NZ32 417 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 CPSF2Q9P2I0 782 aaKnown RBP16.77■□□□□ 0.28
CPSF4-209ENST00000465132 PLAGL1Q9UM63 463 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 PLLPQ9Y342 182 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 DYRK1BQ9Y463 629 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 KCNE2Q9Y6J6 123 aa16.77■□□□□ 0.28
CPSF4-209ENST00000465132 PTPN13Q12923 2485 aa16.77■□□□□ 0.27
CPSF4-209ENST00000465132 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.27
CPSF4-209ENST00000465132 NCF1BA6NI72 391 aaPredicted RBP16.76■□□□□ 0.27
CPSF4-209ENST00000465132 NCF1CA8MVU1 366 aaPredicted RBP16.76■□□□□ 0.27
CPSF4-209ENST00000465132 STX16-NPEPL1H3BU86 382 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 STX16O14662 325 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 PRPF4O43172 522 aaKnown RBP eCLIP16.76■□□□□ 0.27
CPSF4-209ENST00000465132 KATNA1O75449 491 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 RASSF9O75901 435 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 NCF1P14598 390 aaPredicted RBP16.76■□□□□ 0.27
CPSF4-209ENST00000465132 CDH3P22223 829 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 F8A1P23610 371 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 SLC18A1P54219 525 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 PRKAA2P54646 552 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 NAE1Q13564 534 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 IGFBP7Q16270 282 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 CCSMST1Q4G0I0 132 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 TMTC4Q5T4D3 741 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 PRAMEF13Q5VWM6 474 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 C16orf46Q6P387 395 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 SPESP1Q6UW49 350 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 LRRC70Q7Z2Q7 622 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 OR56A3Q8NH54 315 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms